Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.21■□□□□ 0.51
CCR9P51686 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCR9P51686 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.21■□□□□ 0.51
CCR9P51686 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CCR9P51686 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCR9P51686 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.21■□□□□ 0.51
CCR9P51686 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCR9P51686 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCR9P51686 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCR9P51686 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.21■□□□□ 0.51
CCR9P51686 AL136116.3-201ENST00000402907 1138 ntBASIC18.21■□□□□ 0.51
CCR9P51686 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCR9P51686 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.21■□□□□ 0.51
CCR9P51686 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCR9P51686 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCR9P51686 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCR9P51686 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.21■□□□□ 0.51
CCR9P51686 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCR9P51686 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCR9P51686 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
CCR9P51686 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
CCR9P51686 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
CCR9P51686 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.2■□□□□ 0.5
CCR9P51686 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCR9P51686 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCR9P51686 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCR9P51686 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.2■□□□□ 0.5
CCR9P51686 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCR9P51686 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.2■□□□□ 0.5
CCR9P51686 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCR9P51686 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCR9P51686 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCR9P51686 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCR9P51686 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.2■□□□□ 0.5
CCR9P51686 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCR9P51686 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCR9P51686 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.2■□□□□ 0.5
CCR9P51686 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCR9P51686 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCR9P51686 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCR9P51686 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCR9P51686 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCR9P51686 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCR9P51686 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCR9P51686 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.19■□□□□ 0.5
CCR9P51686 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCR9P51686 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.19■□□□□ 0.5
CCR9P51686 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCR9P51686 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCR9P51686 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCR9P51686 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.19■□□□□ 0.5
CCR9P51686 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCR9P51686 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCR9P51686 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.19■□□□□ 0.5
CCR9P51686 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.19■□□□□ 0.5
CCR9P51686 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCR9P51686 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CCR9P51686 AC020907.5-201ENST00000624372 1936 ntBASIC18.19■□□□□ 0.5
CCR9P51686 AC027702.1-201ENST00000563810 1770 ntBASIC18.19■□□□□ 0.5
CCR9P51686 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCR9P51686 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCR9P51686 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
CCR9P51686 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
CCR9P51686 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCR9P51686 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.18■□□□□ 0.5
CCR9P51686 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCR9P51686 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.18■□□□□ 0.5
CCR9P51686 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CCR9P51686 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCR9P51686 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.18■□□□□ 0.5
CCR9P51686 AC024257.2-201ENST00000549699 147 ntBASIC18.18■□□□□ 0.5
CCR9P51686 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.18■□□□□ 0.5
CCR9P51686 AC105233.4-201ENST00000642045 216 ntBASIC18.18■□□□□ 0.5
CCR9P51686 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCR9P51686 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCR9P51686 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCR9P51686 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.18■□□□□ 0.5
CCR9P51686 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.18■□□□□ 0.5
CCR9P51686 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCR9P51686 BX005040.4-201ENST00000637145 1518 ntBASIC18.18■□□□□ 0.5
CCR9P51686 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.18■□□□□ 0.5
CCR9P51686 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.18■□□□□ 0.5
CCR9P51686 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCR9P51686 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCR9P51686 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.17■□□□□ 0.5
CCR9P51686 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.17■□□□□ 0.5
CCR9P51686 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCR9P51686 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCR9P51686 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCR9P51686 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.17■□□□□ 0.5
CCR9P51686 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCR9P51686 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCR9P51686 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCR9P51686 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CCR9P51686 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCR9P51686 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.17■□□□□ 0.5
CCR9P51686 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCR9P51686 AL136162.1-201ENST00000607711 1078 ntBASIC18.17■□□□□ 0.5
CCR9P51686 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCR9P51686 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms