Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.78■□□□□ 0.44
CBX5P45973 AP005212.1-201ENST00000581547 1997 ntBASIC17.78■□□□□ 0.44
CBX5P45973 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CBX5P45973 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.78■□□□□ 0.44
CBX5P45973 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CBX5P45973 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.78■□□□□ 0.44
CBX5P45973 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX5P45973 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX5P45973 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CBX5P45973 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CBX5P45973 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CBX5P45973 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CBX5P45973 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CBX5P45973 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CBX5P45973 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CBX5P45973 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CBX5P45973 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.77■□□□□ 0.44
CBX5P45973 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CBX5P45973 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.77■□□□□ 0.44
CBX5P45973 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CBX5P45973 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CBX5P45973 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CBX5P45973 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CBX5P45973 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CBX5P45973 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CBX5P45973 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.77■□□□□ 0.43
CBX5P45973 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CBX5P45973 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CBX5P45973 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CBX5P45973 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.76■□□□□ 0.43
CBX5P45973 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CBX5P45973 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 AC239859.2-201ENST00000444165 318 ntBASIC17.76■□□□□ 0.43
CBX5P45973 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.76■□□□□ 0.43
CBX5P45973 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CBX5P45973 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.76■□□□□ 0.43
CBX5P45973 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX5P45973 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.75■□□□□ 0.43
CBX5P45973 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CBX5P45973 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX5P45973 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.75■□□□□ 0.43
CBX5P45973 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CBX5P45973 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CBX5P45973 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX5P45973 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.75■□□□□ 0.43
CBX5P45973 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.75■□□□□ 0.43
CBX5P45973 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX5P45973 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CBX5P45973 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
CBX5P45973 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.75■□□□□ 0.43
CBX5P45973 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.75■□□□□ 0.43
CBX5P45973 AC099791.2-201ENST00000605725 427 ntBASIC17.75■□□□□ 0.43
CBX5P45973 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CBX5P45973 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CBX5P45973 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX5P45973 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX5P45973 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX5P45973 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX5P45973 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX5P45973 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX5P45973 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.75■□□□□ 0.43
CBX5P45973 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX5P45973 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX5P45973 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CBX5P45973 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CBX5P45973 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CBX5P45973 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.74■□□□□ 0.43
CBX5P45973 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CBX5P45973 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CBX5P45973 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX5P45973 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.74■□□□□ 0.43
CBX5P45973 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX5P45973 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.74■□□□□ 0.43
CBX5P45973 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.74■□□□□ 0.43
CBX5P45973 MIR3181-201ENST00000578512 73 ntBASIC17.74■□□□□ 0.43
CBX5P45973 AC092171.4-201ENST00000609130 632 ntBASIC17.74■□□□□ 0.43
CBX5P45973 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.74■□□□□ 0.43
CBX5P45973 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.74■□□□□ 0.43
CBX5P45973 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX5P45973 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX5P45973 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX5P45973 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CBX5P45973 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX5P45973 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.74■□□□□ 0.43
CBX5P45973 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX5P45973 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX5P45973 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX5P45973 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms