Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-1P43699 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NKX2-1P43699 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.93■□□□□ 0.3
NKX2-1P43699 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-1P43699 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-1P43699 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NKX2-1P43699 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-1P43699 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-1P43699 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-1P43699 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.93■□□□□ 0.3
NKX2-1P43699 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-1P43699 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-1P43699 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-1P43699 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.93■□□□□ 0.3
NKX2-1P43699 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NKX2-1P43699 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-1P43699 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-1P43699 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-1P43699 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.93■□□□□ 0.3
NKX2-1P43699 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-1P43699 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.93■□□□□ 0.3
NKX2-1P43699 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX2-1P43699 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 AP006587.3-201ENST00000525742 1516 ntBASIC16.92■□□□□ 0.3
NKX2-1P43699 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NKX2-1P43699 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 AC009299.2-201ENST00000482477 511 ntBASIC16.92■□□□□ 0.3
NKX2-1P43699 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX2-1P43699 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NKX2-1P43699 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX2-1P43699 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX2-1P43699 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX2-1P43699 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX2-1P43699 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX2-1P43699 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-1P43699 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-1P43699 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.91■□□□□ 0.3
NKX2-1P43699 AC112907.3-201ENST00000577781 2400 ntBASIC16.91■□□□□ 0.3
NKX2-1P43699 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-1P43699 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-1P43699 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-1P43699 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.91■□□□□ 0.3
NKX2-1P43699 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.91■□□□□ 0.3
NKX2-1P43699 TSPY9P-201ENST00000440215 945 ntBASIC16.91■□□□□ 0.3
NKX2-1P43699 TSPY11P-201ENST00000442607 1045 ntBASIC16.91■□□□□ 0.3
NKX2-1P43699 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-1P43699 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.91■□□□□ 0.3
NKX2-1P43699 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-1P43699 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.91■□□□□ 0.3
NKX2-1P43699 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-1P43699 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NKX2-1P43699 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-1P43699 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NKX2-1P43699 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NKX2-1P43699 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-1P43699 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-1P43699 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NKX2-1P43699 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-1P43699 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-1P43699 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX2-1P43699 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NKX2-1P43699 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-1P43699 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
NKX2-1P43699 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
NKX2-1P43699 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-1P43699 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-1P43699 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NKX2-1P43699 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
NKX2-1P43699 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.9■□□□□ 0.3
NKX2-1P43699 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-1P43699 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-1P43699 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-1P43699 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.9■□□□□ 0.3
NKX2-1P43699 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.9■□□□□ 0.3
NKX2-1P43699 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NKX2-1P43699 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NKX2-1P43699 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-1P43699 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
NKX2-1P43699 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-1P43699 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NKX2-1P43699 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NKX2-1P43699 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NKX2-1P43699 AC087289.5-201ENST00000586076 3175 ntBASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms