Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 PBX2P1-201ENST00000493219 1291 ntBASIC19.25■□□□□ 0.67
TNFRSF1BP20333 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.25■□□□□ 0.67
TNFRSF1BP20333 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 BX005040.4-201ENST00000637145 1518 ntBASIC19.25■□□□□ 0.67
TNFRSF1BP20333 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.25■□□□□ 0.67
TNFRSF1BP20333 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 FP700111.2-201ENST00000619190 1892 ntBASIC19.24■□□□□ 0.67
TNFRSF1BP20333 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.24■□□□□ 0.67
TNFRSF1BP20333 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFRSF1BP20333 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 AC020907.5-201ENST00000624372 1936 ntBASIC19.22■□□□□ 0.67
TNFRSF1BP20333 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 AP001330.3-201ENST00000520123 633 ntBASIC19.22■□□□□ 0.67
TNFRSF1BP20333 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 AC027682.1-201ENST00000562846 899 ntBASIC19.22■□□□□ 0.67
TNFRSF1BP20333 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFRSF1BP20333 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF1BP20333 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
TNFRSF1BP20333 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF1BP20333 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms