Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
SNRPA1P09661 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.58■■□□□ 1.85
SNRPA1P09661 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
SNRPA1P09661 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SNRPA1P09661 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SNRPA1P09661 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.58■■□□□ 1.85
SNRPA1P09661 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
SNRPA1P09661 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
SNRPA1P09661 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SNRPA1P09661 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
SNRPA1P09661 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.57■■□□□ 1.84
SNRPA1P09661 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.57■■□□□ 1.84
SNRPA1P09661 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
SNRPA1P09661 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
SNRPA1P09661 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.57■■□□□ 1.84
SNRPA1P09661 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.57■■□□□ 1.84
SNRPA1P09661 RPS2P52-201ENST00000469610 820 ntBASIC26.57■■□□□ 1.84
SNRPA1P09661 AC093827.2-201ENST00000512654 315 ntBASIC26.57■■□□□ 1.84
SNRPA1P09661 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
SNRPA1P09661 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SNRPA1P09661 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNRPA1P09661 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNRPA1P09661 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.57■■□□□ 1.84
SNRPA1P09661 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SNRPA1P09661 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNRPA1P09661 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.56■■□□□ 1.84
SNRPA1P09661 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
SNRPA1P09661 GCSHP5-201ENST00000443090 522 ntBASIC26.56■■□□□ 1.84
SNRPA1P09661 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SNRPA1P09661 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.56■■□□□ 1.84
SNRPA1P09661 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNRPA1P09661 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.56■■□□□ 1.84
SNRPA1P09661 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNRPA1P09661 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.55■■□□□ 1.84
SNRPA1P09661 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SNRPA1P09661 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SNRPA1P09661 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.55■■□□□ 1.84
SNRPA1P09661 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.55■■□□□ 1.84
SNRPA1P09661 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNRPA1P09661 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SNRPA1P09661 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNRPA1P09661 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNRPA1P09661 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SNRPA1P09661 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SNRPA1P09661 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SNRPA1P09661 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
SNRPA1P09661 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.54■■□□□ 1.84
SNRPA1P09661 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.54■■□□□ 1.84
SNRPA1P09661 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SNRPA1P09661 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.54■■□□□ 1.84
SNRPA1P09661 AC008403.3-201ENST00000598924 454 ntBASIC26.54■■□□□ 1.84
SNRPA1P09661 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
SNRPA1P09661 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC26.54■■□□□ 1.84
SNRPA1P09661 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SNRPA1P09661 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SNRPA1P09661 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNRPA1P09661 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNRPA1P09661 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNRPA1P09661 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SNRPA1P09661 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
SNRPA1P09661 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.53■■□□□ 1.84
SNRPA1P09661 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.53■■□□□ 1.84
SNRPA1P09661 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.53■■□□□ 1.84
SNRPA1P09661 AC073648.6-201ENST00000641589 218 ntBASIC26.53■■□□□ 1.84
SNRPA1P09661 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNRPA1P09661 NXN-202ENST00000537628 1340 ntTSL 3 BASIC26.53■■□□□ 1.84
SNRPA1P09661 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNRPA1P09661 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
SNRPA1P09661 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNRPA1P09661 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNRPA1P09661 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNRPA1P09661 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNRPA1P09661 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNRPA1P09661 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SNRPA1P09661 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
SNRPA1P09661 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SNRPA1P09661 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SNRPA1P09661 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SNRPA1P09661 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SNRPA1P09661 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26.52■■□□□ 1.84
SNRPA1P09661 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SNRPA1P09661 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
SNRPA1P09661 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.52■■□□□ 1.84
SNRPA1P09661 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SNRPA1P09661 AC105020.6-201ENST00000621523 1217 ntBASIC26.52■■□□□ 1.84
SNRPA1P09661 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
SNRPA1P09661 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SNRPA1P09661 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
SNRPA1P09661 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC26.51■■□□□ 1.83
SNRPA1P09661 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SNRPA1P09661 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SNRPA1P09661 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SNRPA1P09661 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.51■■□□□ 1.83
SNRPA1P09661 PNMA6B-201ENST00000538162 1200 ntBASIC26.51■■□□□ 1.83
SNRPA1P09661 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
SNRPA1P09661 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.51■■□□□ 1.83
SNRPA1P09661 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.51■■□□□ 1.83
SNRPA1P09661 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC26.51■■□□□ 1.83
SNRPA1P09661 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SNRPA1P09661 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms