Protein–RNA interactions for Protein: P08519

LPA, Apolipoprotein(a), humanhuman

Predictions only

Length 4,548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPAP08519 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
LPAP08519 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC11.54□□□□□ -0.56
LPAP08519 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LPAP08519 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LPAP08519 RNF146-206ENST00000480444 843 ntTSL 2 BASIC11.54□□□□□ -0.56
LPAP08519 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC11.54□□□□□ -0.56
LPAP08519 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LPAP08519 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LPAP08519 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LPAP08519 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LPAP08519 VMO1-204ENST00000441199 741 ntTSL 2 BASIC11.54□□□□□ -0.56
LPAP08519 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC11.54□□□□□ -0.56
LPAP08519 OR2A1-AS1-207ENST00000486094 819 ntBASIC11.54□□□□□ -0.56
LPAP08519 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LPAP08519 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LPAP08519 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC11.54□□□□□ -0.56
LPAP08519 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LPAP08519 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LPAP08519 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LPAP08519 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC11.53□□□□□ -0.56
LPAP08519 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LPAP08519 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LPAP08519 AL034346.1-201ENST00000568244 1277 ntBASIC11.53□□□□□ -0.56
LPAP08519 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.53□□□□□ -0.56
LPAP08519 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LPAP08519 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LPAP08519 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LPAP08519 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC11.53□□□□□ -0.56
LPAP08519 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC11.53□□□□□ -0.56
LPAP08519 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LPAP08519 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC11.53□□□□□ -0.56
LPAP08519 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC11.53□□□□□ -0.56
LPAP08519 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
LPAP08519 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LPAP08519 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC11.53□□□□□ -0.56
LPAP08519 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC11.53□□□□□ -0.56
LPAP08519 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC11.53□□□□□ -0.56
LPAP08519 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
LPAP08519 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC11.53□□□□□ -0.56
LPAP08519 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LPAP08519 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC11.52□□□□□ -0.56
LPAP08519 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
LPAP08519 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LPAP08519 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.52□□□□□ -0.56
LPAP08519 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC11.52□□□□□ -0.56
LPAP08519 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
LPAP08519 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC11.52□□□□□ -0.56
LPAP08519 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
LPAP08519 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LPAP08519 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LPAP08519 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.52□□□□□ -0.57
LPAP08519 PENK-204ENST00000518770 863 ntTSL 2 BASIC11.52□□□□□ -0.57
LPAP08519 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LPAP08519 AC092865.7-201ENST00000641832 219 ntBASIC11.52□□□□□ -0.57
LPAP08519 TERT-206ENST00000508104 2486 ntTSL 5 BASIC11.52□□□□□ -0.57
LPAP08519 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC11.52□□□□□ -0.57
LPAP08519 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC11.52□□□□□ -0.57
LPAP08519 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
LPAP08519 AC092053.2-201ENST00000640557 1818 ntBASIC11.52□□□□□ -0.57
LPAP08519 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LPAP08519 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
LPAP08519 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LPAP08519 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LPAP08519 PRKY-204ENST00000533551 1019 ntBASIC11.52□□□□□ -0.57
LPAP08519 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.52□□□□□ -0.57
LPAP08519 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.52□□□□□ -0.57
LPAP08519 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LPAP08519 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
LPAP08519 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LPAP08519 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LPAP08519 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LPAP08519 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC11.52□□□□□ -0.57
LPAP08519 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC11.52□□□□□ -0.57
LPAP08519 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC11.52□□□□□ -0.57
LPAP08519 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LPAP08519 AC239809.2-201ENST00000415381 517 ntBASIC11.52□□□□□ -0.57
LPAP08519 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
LPAP08519 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.52□□□□□ -0.57
LPAP08519 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC11.52□□□□□ -0.57
LPAP08519 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LPAP08519 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
LPAP08519 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LPAP08519 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LPAP08519 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LPAP08519 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
LPAP08519 AC091799.1-201ENST00000422823 811 ntBASIC11.51□□□□□ -0.57
LPAP08519 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.51□□□□□ -0.57
LPAP08519 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
LPAP08519 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LPAP08519 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC11.51□□□□□ -0.57
LPAP08519 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LPAP08519 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC11.51□□□□□ -0.57
LPAP08519 AC010542.4-201ENST00000563151 1910 ntBASIC11.51□□□□□ -0.57
LPAP08519 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LPAP08519 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LPAP08519 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
LPAP08519 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC11.51□□□□□ -0.57
LPAP08519 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LPAP08519 KRT17P2-201ENST00000300992 1314 ntBASIC11.51□□□□□ -0.57
LPAP08519 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms