Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
THBS1P07996 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.08■□□□□ 0.64
THBS1P07996 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
THBS1P07996 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
THBS1P07996 GABARAPL3-202ENST00000624044 1851 ntBASIC19.07■□□□□ 0.64
THBS1P07996 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
THBS1P07996 AC007225.1-201ENST00000566331 1836 ntBASIC19.07■□□□□ 0.64
THBS1P07996 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
THBS1P07996 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
THBS1P07996 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
THBS1P07996 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
THBS1P07996 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.07■□□□□ 0.64
THBS1P07996 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
THBS1P07996 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
THBS1P07996 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
THBS1P07996 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.07■□□□□ 0.64
THBS1P07996 AC104187.1-201ENST00000607510 612 ntBASIC19.07■□□□□ 0.64
THBS1P07996 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.07■□□□□ 0.64
THBS1P07996 RARRES2P11-201ENST00000635158 484 ntBASIC19.07■□□□□ 0.64
THBS1P07996 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
THBS1P07996 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.07■□□□□ 0.64
THBS1P07996 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
THBS1P07996 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
THBS1P07996 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
THBS1P07996 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
THBS1P07996 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
THBS1P07996 AP005212.1-201ENST00000581547 1997 ntBASIC19.06■□□□□ 0.64
THBS1P07996 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
THBS1P07996 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
THBS1P07996 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
THBS1P07996 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.06■□□□□ 0.64
THBS1P07996 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.06■□□□□ 0.64
THBS1P07996 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.06■□□□□ 0.64
THBS1P07996 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
THBS1P07996 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
THBS1P07996 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
THBS1P07996 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
THBS1P07996 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.05■□□□□ 0.64
THBS1P07996 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
THBS1P07996 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
THBS1P07996 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.05■□□□□ 0.64
THBS1P07996 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.05■□□□□ 0.64
THBS1P07996 KRT18P20-201ENST00000548986 1279 ntBASIC19.05■□□□□ 0.64
THBS1P07996 CCDC92B-201ENST00000575506 885 ntBASIC19.05■□□□□ 0.64
THBS1P07996 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 AP001160.3-201ENST00000601484 763 ntBASIC19.05■□□□□ 0.64
THBS1P07996 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.05■□□□□ 0.64
THBS1P07996 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.05■□□□□ 0.64
THBS1P07996 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
THBS1P07996 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS1P07996 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
THBS1P07996 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
THBS1P07996 LINC01006-201ENST00000333319 2292 ntBASIC19.04■□□□□ 0.64
THBS1P07996 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.04■□□□□ 0.64
THBS1P07996 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
THBS1P07996 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
THBS1P07996 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
THBS1P07996 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
THBS1P07996 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.04■□□□□ 0.64
THBS1P07996 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.04■□□□□ 0.64
THBS1P07996 KRT18P14-201ENST00000534205 1250 ntBASIC19.04■□□□□ 0.64
THBS1P07996 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.04■□□□□ 0.64
THBS1P07996 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.04■□□□□ 0.64
THBS1P07996 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
THBS1P07996 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.04■□□□□ 0.64
THBS1P07996 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
THBS1P07996 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
THBS1P07996 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
THBS1P07996 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.03■□□□□ 0.64
THBS1P07996 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.03■□□□□ 0.64
THBS1P07996 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
THBS1P07996 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
THBS1P07996 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
THBS1P07996 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
THBS1P07996 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
THBS1P07996 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
THBS1P07996 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
THBS1P07996 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.03■□□□□ 0.64
THBS1P07996 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
THBS1P07996 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.03■□□□□ 0.64
THBS1P07996 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.03■□□□□ 0.64
THBS1P07996 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
THBS1P07996 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
THBS1P07996 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
THBS1P07996 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
THBS1P07996 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
THBS1P07996 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
THBS1P07996 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms