Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.63■□□□□ 0.25
UPK2O00526 AC008175.2-201ENST00000612840 297 ntBASIC16.63■□□□□ 0.25
UPK2O00526 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.63■□□□□ 0.25
UPK2O00526 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.63■□□□□ 0.25
UPK2O00526 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.63■□□□□ 0.25
UPK2O00526 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
UPK2O00526 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK2O00526 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UPK2O00526 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK2O00526 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
UPK2O00526 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.62■□□□□ 0.25
UPK2O00526 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
UPK2O00526 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
UPK2O00526 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK2O00526 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.62■□□□□ 0.25
UPK2O00526 POU5F1P4-201ENST00000413175 1085 ntBASIC16.62■□□□□ 0.25
UPK2O00526 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK2O00526 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.62■□□□□ 0.25
UPK2O00526 AC142381.2-201ENST00000566120 298 ntBASIC16.62■□□□□ 0.25
UPK2O00526 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UPK2O00526 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK2O00526 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK2O00526 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.62■□□□□ 0.25
UPK2O00526 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK2O00526 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
UPK2O00526 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK2O00526 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
UPK2O00526 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.61■□□□□ 0.25
UPK2O00526 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.61■□□□□ 0.25
UPK2O00526 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
UPK2O00526 AC011484.1-201ENST00000377652 1995 ntBASIC16.61■□□□□ 0.25
UPK2O00526 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
UPK2O00526 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
UPK2O00526 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.61■□□□□ 0.25
UPK2O00526 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.61■□□□□ 0.25
UPK2O00526 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 AC079140.4-201ENST00000507448 529 ntBASIC16.61■□□□□ 0.25
UPK2O00526 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UPK2O00526 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.61■□□□□ 0.25
UPK2O00526 MIR6084-201ENST00000622012 110 ntBASIC16.61■□□□□ 0.25
UPK2O00526 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.61■□□□□ 0.25
UPK2O00526 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.61■□□□□ 0.25
UPK2O00526 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.61■□□□□ 0.25
UPK2O00526 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
UPK2O00526 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK2O00526 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPK2O00526 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.6■□□□□ 0.25
UPK2O00526 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
UPK2O00526 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPK2O00526 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK2O00526 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPK2O00526 AC027702.1-201ENST00000563810 1770 ntBASIC16.6■□□□□ 0.25
UPK2O00526 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK2O00526 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK2O00526 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPK2O00526 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK2O00526 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.6■□□□□ 0.25
UPK2O00526 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.6■□□□□ 0.25
UPK2O00526 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPK2O00526 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UPK2O00526 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK2O00526 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK2O00526 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
UPK2O00526 KRT87P-202ENST00000534226 1464 ntBASIC16.6■□□□□ 0.25
UPK2O00526 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK2O00526 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK2O00526 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
UPK2O00526 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.6■□□□□ 0.25
UPK2O00526 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.59■□□□□ 0.25
UPK2O00526 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.59■□□□□ 0.25
UPK2O00526 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK2O00526 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.59■□□□□ 0.25
UPK2O00526 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPK2O00526 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.59■□□□□ 0.25
UPK2O00526 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK2O00526 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK2O00526 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK2O00526 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms