Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 CA15P2-201ENST00000611168 834 ntBASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 AC005332.8-201ENST00000622750 2735 ntBASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAV22A0A0B4J277 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TRAV22A0A0B4J277 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRAV22A0A0B4J277 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRAV22A0A0B4J277 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC11.77□□□□□ -0.52
TRAV22A0A0B4J277 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRAV22A0A0B4J277 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
TRAV22A0A0B4J277 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 AC116562.4-201ENST00000641316 2276 ntBASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAV22A0A0B4J277 PARN-205ENST00000539279 1557 ntTSL 2 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms