Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 AL354811.1-201ENST00000610286 706 ntBASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV12-3A0A0B4J271 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV12-3A0A0B4J271 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 MIR6084-201ENST00000622012 110 ntBASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 AL358852.1-201ENST00000623174 1268 ntBASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-3A0A0B4J271 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 AC005837.3-201ENST00000612163 286 ntBASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-3A0A0B4J271 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms