Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV4A0A0B4J268 KRT87P-202ENST00000534226 1464 ntBASIC14.91□□□□□ -0.02
TRAV4A0A0B4J268 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV4A0A0B4J268 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAV4A0A0B4J268 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV4A0A0B4J268 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV4A0A0B4J268 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV4A0A0B4J268 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV4A0A0B4J268 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
TRAV4A0A0B4J268 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV4A0A0B4J268 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRAV4A0A0B4J268 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRAV4A0A0B4J268 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV4A0A0B4J268 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 AC008175.2-201ENST00000612840 297 ntBASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV4A0A0B4J268 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 AP004607.4-201ENST00000530158 1459 ntBASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 AC007952.6-201ENST00000573168 2673 ntBASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 AC003957.1-201ENST00000625108 2673 ntBASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
TRAV4A0A0B4J268 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 LINC02228-203ENST00000641970 1355 ntBASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 POU5F1P4-201ENST00000413175 1085 ntBASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV4A0A0B4J268 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV4A0A0B4J268 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms