Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CCNB1IP1-204ENST00000398163 1604 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
SLC1A1P43005 SERAC1-205ENST00000607000 2284 ntTSL 2 BASIC10.32□□□□□ -0.76
SLC1A1P43005 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SLC1A1P43005 MEIS1-212ENST00000495021 2836 ntTSL 2 BASIC10.32□□□□□ -0.76
SLC1A1P43005 KPNA2-201ENST00000330459 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 TMPRSS4-AS1-204ENST00000636151 3397 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SLC1A1P43005 TYW1B-202ENST00000612372 1543 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 FBXL2-216ENST00000484457 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 SEMA6A-212ENST00000513137 3640 ntTSL 2 BASIC10.32□□□□□ -0.76
SLC1A1P43005 KLHL14-202ENST00000359358 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SLC1A1P43005 NTPCR-201ENST00000366627 1762 ntTSL 3 BASIC10.31□□□□□ -0.76
SLC1A1P43005 TCEANC2-203ENST00000391366 1783 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 VPS45-202ENST00000369130 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 AP000350.7-201ENST00000624923 8030 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 OXNAD1-201ENST00000285083 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 LINC00470-201ENST00000412816 2031 ntTSL 2 BASIC10.31□□□□□ -0.76
SLC1A1P43005 ERVMER61-1-201ENST00000429725 2393 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 TRIM39-203ENST00000396547 3187 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC10.31□□□□□ -0.76
SLC1A1P43005 AL513122.1-201ENST00000455437 1463 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 CASC19-229ENST00000641418 1373 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 KIR3DX1-205ENST00000610811 3325 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
SLC1A1P43005 NDUFS1-203ENST00000432169 2080 ntTSL 2 BASIC10.31□□□□□ -0.76
SLC1A1P43005 MYRIP-210ENST00000539167 4635 ntTSL 2 BASIC10.31□□□□□ -0.76
SLC1A1P43005 AC005077.4-201ENST00000421546 3495 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 RARRES3-201ENST00000255688 749 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 HBE1-201ENST00000292896 827 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 SPRR1B-201ENST00000307098 620 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 TAL2-201ENST00000334077 656 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
SLC1A1P43005 PARP1-201ENST00000366790 570 ntTSL 2 BASIC10.31□□□□□ -0.76
SLC1A1P43005 PPP1R7-206ENST00000406106 965 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 COPS5P1-201ENST00000415778 785 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 AC011247.1-202ENST00000417039 1156 ntTSL 5 BASIC10.31□□□□□ -0.76
SLC1A1P43005 BX284668.1-202ENST00000422345 735 ntTSL 5 BASIC10.31□□□□□ -0.76
SLC1A1P43005 CD24P1-201ENST00000422383 225 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 BANF1P5-201ENST00000445285 259 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 RN7SL364P-201ENST00000473668 272 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 RPL12P35-201ENST00000477007 496 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 CCDC58-205ENST00000479899 545 ntTSL 3 BASIC10.31□□□□□ -0.76
SLC1A1P43005 TMED5-204ENST00000479918 1296 ntTSL 3 BASIC10.31□□□□□ -0.76
SLC1A1P43005 MGC32805-201ENST00000503529 579 ntTSL 3 BASIC10.31□□□□□ -0.76
SLC1A1P43005 PPBPP2-202ENST00000514391 346 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 AC005280.1-201ENST00000515412 537 ntTSL 5 BASIC10.31□□□□□ -0.76
SLC1A1P43005 AC008514.1-203ENST00000518172 574 ntTSL 4 BASIC10.31□□□□□ -0.76
SLC1A1P43005 AC025437.6-201ENST00000518624 935 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC10.31□□□□□ -0.76
SLC1A1P43005 ETFRF1-203ENST00000554266 429 ntTSL 3 BASIC10.31□□□□□ -0.76
SLC1A1P43005 LINC00564-201ENST00000567258 1119 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 AL138966.1-201ENST00000603212 313 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC10.31□□□□□ -0.76
SLC1A1P43005 NRXN1-212ENST00000412315 2215 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 SYT1-202ENST00000393240 3095 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC10.31□□□□□ -0.76
SLC1A1P43005 NFKB1-212ENST00000600343 4010 ntTSL 2 BASIC10.31□□□□□ -0.76
SLC1A1P43005 ANXA10-201ENST00000359299 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 FLT1P1-201ENST00000451650 1320 ntBASIC10.31□□□□□ -0.76
SLC1A1P43005 PTPN20-225ENST00000511769 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 ABLIM3-205ENST00000504238 2774 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SLC1A1P43005 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC10.3□□□□□ -0.76
SLC1A1P43005 LRRC37A2-203ENST00000576629 5669 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SLC1A1P43005 AL138690.1-201ENST00000568811 2243 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 ANXA7-202ENST00000372921 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 DBF4B-201ENST00000315005 2997 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 RAB30-201ENST00000260056 1393 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SLC1A1P43005 LRRC52-201ENST00000294818 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 FPGT-201ENST00000370894 1380 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 EZH1-205ENST00000585893 2394 ntTSL 2 BASIC10.3□□□□□ -0.76
SLC1A1P43005 EZH1-217ENST00000590078 2392 ntTSL 2 BASIC10.3□□□□□ -0.76
SLC1A1P43005 FYN-229ENST00000538466 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 AP001107.1-201ENST00000501708 2792 ntTSL 2 BASIC10.3□□□□□ -0.76
SLC1A1P43005 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 OBP2A-201ENST00000340780 741 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 PDZD11-202ENST00000374454 784 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SLC1A1P43005 C9orf85-203ENST00000377031 1107 ntTSL 3 BASIC10.3□□□□□ -0.76
SLC1A1P43005 CCR3-203ENST00000395942 1201 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
SLC1A1P43005 KRTAP12-3-201ENST00000397907 410 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
SLC1A1P43005 RNASE4-201ENST00000397995 853 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SLC1A1P43005 NPIPB2-202ENST00000399147 1194 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
SLC1A1P43005 SOX2OT_exon3.1-201ENST00000410534 276 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 RN7SKP8-201ENST00000411037 358 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 PA2G4P2-201ENST00000414718 1200 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 LINC02087-201ENST00000418821 951 ntTSL 2 BASIC10.3□□□□□ -0.76
SLC1A1P43005 FRG2FP-202ENST00000419104 559 ntTSL 4 BASIC10.3□□□□□ -0.76
SLC1A1P43005 ZDHHC11-202ENST00000424784 943 ntTSL 5 BASIC10.3□□□□□ -0.76
SLC1A1P43005 TUBB4BP3-201ENST00000437546 271 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 AL445072.1-201ENST00000438994 639 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 C1QTNF9-AS1-201ENST00000449656 470 ntTSL 5 BASIC10.3□□□□□ -0.76
SLC1A1P43005 AC091805.1-201ENST00000498395 342 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 AC104116.1-201ENST00000504539 411 ntTSL 5 BASIC10.3□□□□□ -0.76
SLC1A1P43005 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
SLC1A1P43005 AC233724.5-201ENST00000509526 598 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 AC007036.3-201ENST00000511893 614 ntTSL 3 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 298.8 ms