Protein–RNA interactions for Protein: Q9Y534

CSDC2, Cold shock domain-containing protein C2, humanhuman

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2Q9Y534 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSDC2Q9Y534 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 AC055733.4-201ENST00000638462 1354 ntBASIC14.35□□□□□ -0.11
CSDC2Q9Y534 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 AC027702.1-201ENST00000563810 1770 ntBASIC14.35□□□□□ -0.11
CSDC2Q9Y534 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSDC2Q9Y534 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSDC2Q9Y534 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSDC2Q9Y534 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSDC2Q9Y534 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSDC2Q9Y534 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSDC2Q9Y534 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSDC2Q9Y534 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.33□□□□□ -0.12
CSDC2Q9Y534 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSDC2Q9Y534 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CSDC2Q9Y534 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CSDC2Q9Y534 AL162377.1-201ENST00000618844 1793 ntBASIC14.32□□□□□ -0.12
CSDC2Q9Y534 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSDC2Q9Y534 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
CSDC2Q9Y534 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSDC2Q9Y534 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSDC2Q9Y534 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms