Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC007613.1-201ENST00000572811 2597 ntBASIC16.8■□□□□ 0.28
NKX6-2Q9C056 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 AC112907.3-201ENST00000577781 2400 ntBASIC16.79■□□□□ 0.28
NKX6-2Q9C056 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.79■□□□□ 0.28
NKX6-2Q9C056 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 FP325331.1-202ENST00000623531 1380 ntBASIC16.78■□□□□ 0.28
NKX6-2Q9C056 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 LINC01960-201ENST00000563759 1884 ntBASIC16.78■□□□□ 0.28
NKX6-2Q9C056 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 LINC01529-204ENST00000636474 1715 ntBASIC16.78■□□□□ 0.28
NKX6-2Q9C056 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NKX6-2Q9C056 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-2Q9C056 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-2Q9C056 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-2Q9C056 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
NKX6-2Q9C056 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-2Q9C056 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.77■□□□□ 0.28
NKX6-2Q9C056 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.77■□□□□ 0.28
NKX6-2Q9C056 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-2Q9C056 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-2Q9C056 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-2Q9C056 DUX4L9-201ENST00000449051 1259 ntBASIC16.77■□□□□ 0.28
NKX6-2Q9C056 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-2Q9C056 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NKX6-2Q9C056 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NKX6-2Q9C056 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NKX6-2Q9C056 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NKX6-2Q9C056 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NKX6-2Q9C056 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
NKX6-2Q9C056 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
NKX6-2Q9C056 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NKX6-2Q9C056 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.75■□□□□ 0.27
NKX6-2Q9C056 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.75■□□□□ 0.27
NKX6-2Q9C056 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-2Q9C056 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
NKX6-2Q9C056 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-2Q9C056 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-2Q9C056 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-2Q9C056 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-2Q9C056 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-2Q9C056 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.75■□□□□ 0.27
NKX6-2Q9C056 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.75■□□□□ 0.27
NKX6-2Q9C056 AC009086.3-201ENST00000623486 1008 ntBASIC16.75■□□□□ 0.27
NKX6-2Q9C056 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms