Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.73■□□□□ 0.75
CGREF1Q99674 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CGREF1Q99674 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.72■□□□□ 0.75
CGREF1Q99674 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CGREF1Q99674 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CGREF1Q99674 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.72■□□□□ 0.75
CGREF1Q99674 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CGREF1Q99674 AC131281.2-201ENST00000520478 145 ntBASIC19.72■□□□□ 0.75
CGREF1Q99674 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CGREF1Q99674 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CGREF1Q99674 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.72■□□□□ 0.75
CGREF1Q99674 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CGREF1Q99674 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CGREF1Q99674 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CGREF1Q99674 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CGREF1Q99674 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.72■□□□□ 0.75
CGREF1Q99674 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CGREF1Q99674 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CGREF1Q99674 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CGREF1Q99674 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.71■□□□□ 0.75
CGREF1Q99674 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CGREF1Q99674 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CGREF1Q99674 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CGREF1Q99674 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CGREF1Q99674 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CGREF1Q99674 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CGREF1Q99674 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CGREF1Q99674 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CGREF1Q99674 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.71■□□□□ 0.75
CGREF1Q99674 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.71■□□□□ 0.75
CGREF1Q99674 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CGREF1Q99674 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CGREF1Q99674 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CGREF1Q99674 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CGREF1Q99674 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CGREF1Q99674 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CGREF1Q99674 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CGREF1Q99674 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CGREF1Q99674 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.7■□□□□ 0.74
CGREF1Q99674 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CGREF1Q99674 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CGREF1Q99674 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.7■□□□□ 0.74
CGREF1Q99674 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.7■□□□□ 0.74
CGREF1Q99674 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.7■□□□□ 0.74
CGREF1Q99674 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.7■□□□□ 0.74
CGREF1Q99674 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.7■□□□□ 0.74
CGREF1Q99674 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.7■□□□□ 0.74
CGREF1Q99674 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CGREF1Q99674 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CGREF1Q99674 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
CGREF1Q99674 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CGREF1Q99674 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CGREF1Q99674 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.7■□□□□ 0.74
CGREF1Q99674 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.7■□□□□ 0.74
CGREF1Q99674 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CGREF1Q99674 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CGREF1Q99674 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.69■□□□□ 0.74
CGREF1Q99674 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CGREF1Q99674 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.69■□□□□ 0.74
CGREF1Q99674 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.69■□□□□ 0.74
CGREF1Q99674 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CGREF1Q99674 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.69■□□□□ 0.74
CGREF1Q99674 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CGREF1Q99674 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.69■□□□□ 0.74
CGREF1Q99674 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CGREF1Q99674 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CGREF1Q99674 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.69■□□□□ 0.74
CGREF1Q99674 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CGREF1Q99674 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.69■□□□□ 0.74
CGREF1Q99674 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CGREF1Q99674 PCDHAC2-203ENST00000615316 3011 ntBASIC19.69■□□□□ 0.74
CGREF1Q99674 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CGREF1Q99674 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CGREF1Q99674 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CGREF1Q99674 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CGREF1Q99674 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.68■□□□□ 0.74
CGREF1Q99674 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CGREF1Q99674 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CGREF1Q99674 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.68■□□□□ 0.74
CGREF1Q99674 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CGREF1Q99674 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CGREF1Q99674 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.68■□□□□ 0.74
CGREF1Q99674 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CGREF1Q99674 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.68■□□□□ 0.74
CGREF1Q99674 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.68■□□□□ 0.74
CGREF1Q99674 MIR4767-201ENST00000582827 78 ntBASIC19.68■□□□□ 0.74
CGREF1Q99674 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.68■□□□□ 0.74
CGREF1Q99674 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.68■□□□□ 0.74
CGREF1Q99674 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.68■□□□□ 0.74
CGREF1Q99674 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.68■□□□□ 0.74
CGREF1Q99674 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CGREF1Q99674 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CGREF1Q99674 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CGREF1Q99674 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CGREF1Q99674 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CGREF1Q99674 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CGREF1Q99674 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CGREF1Q99674 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CGREF1Q99674 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.67■□□□□ 0.74
CGREF1Q99674 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms