Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
IFT43Q96FT9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
IFT43Q96FT9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.35■■□□□ 1.01
IFT43Q96FT9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
IFT43Q96FT9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IFT43Q96FT9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.35■■□□□ 1.01
IFT43Q96FT9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IFT43Q96FT9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.35■■□□□ 1.01
IFT43Q96FT9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
IFT43Q96FT9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.34■■□□□ 1.01
IFT43Q96FT9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.34■■□□□ 1.01
IFT43Q96FT9 RAP2CP1-201ENST00000605103 478 ntBASIC21.34■■□□□ 1.01
IFT43Q96FT9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 BID-214ENST00000617586 542 ntTSL 5 BASIC21.34■■□□□ 1.01
IFT43Q96FT9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.34■■□□□ 1.01
IFT43Q96FT9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
IFT43Q96FT9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.34■■□□□ 1.01
IFT43Q96FT9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
IFT43Q96FT9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.34■■□□□ 1.01
IFT43Q96FT9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFT43Q96FT9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.34■■□□□ 1.01
IFT43Q96FT9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
IFT43Q96FT9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
IFT43Q96FT9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
IFT43Q96FT9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.33■■□□□ 1.01
IFT43Q96FT9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.33■■□□□ 1.01
IFT43Q96FT9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.33■■□□□ 1.01
IFT43Q96FT9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFT43Q96FT9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
IFT43Q96FT9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.33■■□□□ 1
IFT43Q96FT9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.33■■□□□ 1
IFT43Q96FT9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
IFT43Q96FT9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
IFT43Q96FT9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.32■■□□□ 1
IFT43Q96FT9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
IFT43Q96FT9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.32■■□□□ 1
IFT43Q96FT9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.32■■□□□ 1
IFT43Q96FT9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.32■■□□□ 1
IFT43Q96FT9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.32■■□□□ 1
IFT43Q96FT9 EEF1DP3-203ENST00000566025 782 ntBASIC21.32■■□□□ 1
IFT43Q96FT9 AC053503.5-201ENST00000601508 636 ntBASIC21.32■■□□□ 1
IFT43Q96FT9 AC073111.5-205ENST00000641717 521 ntBASIC21.32■■□□□ 1
IFT43Q96FT9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.32■■□□□ 1
IFT43Q96FT9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
IFT43Q96FT9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.32■■□□□ 1
IFT43Q96FT9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
IFT43Q96FT9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.31■■□□□ 1
IFT43Q96FT9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IFT43Q96FT9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IFT43Q96FT9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
IFT43Q96FT9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IFT43Q96FT9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IFT43Q96FT9 CDCA4P2-201ENST00000441182 718 ntBASIC21.31■■□□□ 1
IFT43Q96FT9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.31■■□□□ 1
IFT43Q96FT9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.31■■□□□ 1
IFT43Q96FT9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.31■■□□□ 1
IFT43Q96FT9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.31■■□□□ 1
IFT43Q96FT9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms