Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP9XQ93008 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
USP9XQ93008 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.34■□□□□ 0.53
USP9XQ93008 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
USP9XQ93008 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
USP9XQ93008 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP9XQ93008 KRT8P9-201ENST00000558927 1449 ntBASIC18.34■□□□□ 0.53
USP9XQ93008 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP9XQ93008 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP9XQ93008 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.34■□□□□ 0.53
USP9XQ93008 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
USP9XQ93008 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP9XQ93008 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP9XQ93008 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.33■□□□□ 0.52
USP9XQ93008 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.33■□□□□ 0.52
USP9XQ93008 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.33■□□□□ 0.52
USP9XQ93008 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.33■□□□□ 0.52
USP9XQ93008 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
USP9XQ93008 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP9XQ93008 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP9XQ93008 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP9XQ93008 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
USP9XQ93008 AC079089.2-201ENST00000531211 1277 ntBASIC18.33■□□□□ 0.52
USP9XQ93008 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP9XQ93008 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP9XQ93008 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
USP9XQ93008 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP9XQ93008 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
USP9XQ93008 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
USP9XQ93008 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.32■□□□□ 0.52
USP9XQ93008 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.32■□□□□ 0.52
USP9XQ93008 AC026471.5-201ENST00000615068 467 ntBASIC18.32■□□□□ 0.52
USP9XQ93008 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.32■□□□□ 0.52
USP9XQ93008 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
USP9XQ93008 UPK3BP1-201ENST00000428678 509 ntBASIC18.32■□□□□ 0.52
USP9XQ93008 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.32■□□□□ 0.52
USP9XQ93008 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.32■□□□□ 0.52
USP9XQ93008 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP9XQ93008 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP9XQ93008 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
USP9XQ93008 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
USP9XQ93008 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP9XQ93008 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP9XQ93008 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.31■□□□□ 0.52
USP9XQ93008 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.31■□□□□ 0.52
USP9XQ93008 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP9XQ93008 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.31■□□□□ 0.52
USP9XQ93008 KRT126P-201ENST00000549467 1181 ntBASIC18.31■□□□□ 0.52
USP9XQ93008 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP9XQ93008 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP9XQ93008 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP9XQ93008 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP9XQ93008 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP9XQ93008 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP9XQ93008 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP9XQ93008 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.31■□□□□ 0.52
USP9XQ93008 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.31■□□□□ 0.52
USP9XQ93008 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.31■□□□□ 0.52
USP9XQ93008 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.3■□□□□ 0.52
USP9XQ93008 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.3■□□□□ 0.52
USP9XQ93008 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.3■□□□□ 0.52
USP9XQ93008 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.3■□□□□ 0.52
USP9XQ93008 FAM21FP-204ENST00000608637 956 ntBASIC18.3■□□□□ 0.52
USP9XQ93008 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.3■□□□□ 0.52
USP9XQ93008 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
USP9XQ93008 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP9XQ93008 AC142381.3-201ENST00000568208 1670 ntBASIC18.3■□□□□ 0.52
USP9XQ93008 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP9XQ93008 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP9XQ93008 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
USP9XQ93008 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP9XQ93008 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP9XQ93008 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
USP9XQ93008 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP9XQ93008 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.29■□□□□ 0.52
USP9XQ93008 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP9XQ93008 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP9XQ93008 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP9XQ93008 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP9XQ93008 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
USP9XQ93008 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
USP9XQ93008 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.29■□□□□ 0.52
USP9XQ93008 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
USP9XQ93008 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.29■□□□□ 0.52
USP9XQ93008 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.29■□□□□ 0.52
USP9XQ93008 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP9XQ93008 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
USP9XQ93008 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.29■□□□□ 0.52
USP9XQ93008 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
USP9XQ93008 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP9XQ93008 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.29■□□□□ 0.52
USP9XQ93008 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP9XQ93008 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.29■□□□□ 0.52
USP9XQ93008 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP9XQ93008 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
USP9XQ93008 LINC01124-201ENST00000409786 2117 ntBASIC18.29■□□□□ 0.52
USP9XQ93008 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.29■□□□□ 0.52
USP9XQ93008 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP9XQ93008 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.29■□□□□ 0.52
USP9XQ93008 AC120498.8-201ENST00000614275 531 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms