Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 EMBP1-201ENST00000458200 901 ntBASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 ERN1-208ENST00000606895 2068 ntBASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 SLC25A6P4-201ENST00000586535 553 ntBASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 AC004264.1-201ENST00000608354 794 ntBASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 FXN-203ENST00000396366 922 ntTSL 2 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 AC069148.1-201ENST00000608741 768 ntBASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 AC117947.1-201ENST00000427448 529 ntBASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 POLD2P1-201ENST00000511220 997 ntBASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SYNE2Q8WXH0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 AC005332.1-201ENST00000577698 1310 ntBASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 AC116407.4-201ENST00000623319 1061 ntBASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 MIR3652-201ENST00000579335 131 ntBASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 TSPY5P-201ENST00000426936 936 ntBASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
SYNE2Q8WXH0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms