Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ARHGEF40Q8TER5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC31.29■■■□□ 2.6
ARHGEF40Q8TER5 MIR6786-201ENST00000616843 113 ntBASIC31.29■■■□□ 2.6
ARHGEF40Q8TER5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ARHGEF40Q8TER5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ARHGEF40Q8TER5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC31.29■■■□□ 2.6
ARHGEF40Q8TER5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
ARHGEF40Q8TER5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ARHGEF40Q8TER5 ARMC10P1-201ENST00000313754 855 ntBASIC31.29■■■□□ 2.6
ARHGEF40Q8TER5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
ARHGEF40Q8TER5 AC007322.3-201ENST00000426526 701 ntBASIC31.29■■■□□ 2.6
ARHGEF40Q8TER5 AC026471.5-201ENST00000615068 467 ntBASIC31.29■■■□□ 2.6
ARHGEF40Q8TER5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 AC145285.6-201ENST00000604632 637 ntBASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ARHGEF40Q8TER5 ANOS2P-203ENST00000472227 1816 ntBASIC31.27■■■□□ 2.6
ARHGEF40Q8TER5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ARHGEF40Q8TER5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARHGEF40Q8TER5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC31.27■■■□□ 2.6
ARHGEF40Q8TER5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC31.27■■■□□ 2.6
ARHGEF40Q8TER5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ARHGEF40Q8TER5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
ARHGEF40Q8TER5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARHGEF40Q8TER5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ARHGEF40Q8TER5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ARHGEF40Q8TER5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.6
ARHGEF40Q8TER5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
ARHGEF40Q8TER5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
ARHGEF40Q8TER5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC31.26■■■□□ 2.6
ARHGEF40Q8TER5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC31.26■■■□□ 2.59
ARHGEF40Q8TER5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC31.26■■■□□ 2.59
ARHGEF40Q8TER5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC31.26■■■□□ 2.59
ARHGEF40Q8TER5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
ARHGEF40Q8TER5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
ARHGEF40Q8TER5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC31.24■■■□□ 2.59
ARHGEF40Q8TER5 NME3-204ENST00000563498 920 ntTSL 2 BASIC31.24■■■□□ 2.59
ARHGEF40Q8TER5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC31.24■■■□□ 2.59
ARHGEF40Q8TER5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ARHGEF40Q8TER5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ARHGEF40Q8TER5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
ARHGEF40Q8TER5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC31.24■■■□□ 2.59
ARHGEF40Q8TER5 AP003071.4-201ENST00000562276 1284 ntBASIC31.24■■■□□ 2.59
ARHGEF40Q8TER5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC31.24■■■□□ 2.59
ARHGEF40Q8TER5 AL590326.2-201ENST00000625139 305 ntBASIC31.24■■■□□ 2.59
ARHGEF40Q8TER5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
ARHGEF40Q8TER5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC31.24■■■□□ 2.59
ARHGEF40Q8TER5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ARHGEF40Q8TER5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ARHGEF40Q8TER5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
ARHGEF40Q8TER5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ARHGEF40Q8TER5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ARHGEF40Q8TER5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ARHGEF40Q8TER5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ARHGEF40Q8TER5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC31.23■■■□□ 2.59
ARHGEF40Q8TER5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC31.23■■■□□ 2.59
ARHGEF40Q8TER5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC31.23■■■□□ 2.59
ARHGEF40Q8TER5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC31.23■■■□□ 2.59
ARHGEF40Q8TER5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.23■■■□□ 2.59
ARHGEF40Q8TER5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ARHGEF40Q8TER5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC31.22■■■□□ 2.59
ARHGEF40Q8TER5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ARHGEF40Q8TER5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ARHGEF40Q8TER5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC31.22■■■□□ 2.59
ARHGEF40Q8TER5 AC113347.1-201ENST00000413321 391 ntBASIC31.22■■■□□ 2.59
ARHGEF40Q8TER5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC31.22■■■□□ 2.59
ARHGEF40Q8TER5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC31.22■■■□□ 2.59
ARHGEF40Q8TER5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ARHGEF40Q8TER5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ARHGEF40Q8TER5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC31.22■■■□□ 2.59
ARHGEF40Q8TER5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ARHGEF40Q8TER5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC31.21■■■□□ 2.59
ARHGEF40Q8TER5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC31.21■■■□□ 2.59
ARHGEF40Q8TER5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC31.21■■■□□ 2.59
ARHGEF40Q8TER5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
ARHGEF40Q8TER5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms