Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 BX005040.4-201ENST00000637145 1518 ntBASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCHCR1Q8TD31 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCHCR1Q8TD31 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CCHCR1Q8TD31 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CCHCR1Q8TD31 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCHCR1Q8TD31 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCHCR1Q8TD31 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCHCR1Q8TD31 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCHCR1Q8TD31 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCHCR1Q8TD31 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCHCR1Q8TD31 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCHCR1Q8TD31 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.58■■□□□ 1.05
CCHCR1Q8TD31 MIR6084-201ENST00000622012 110 ntBASIC21.58■■□□□ 1.05
CCHCR1Q8TD31 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CCHCR1Q8TD31 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCHCR1Q8TD31 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCHCR1Q8TD31 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.58■■□□□ 1.04
CCHCR1Q8TD31 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCHCR1Q8TD31 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.58■■□□□ 1.04
CCHCR1Q8TD31 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCHCR1Q8TD31 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.58■■□□□ 1.04
CCHCR1Q8TD31 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCHCR1Q8TD31 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 AC009237.3-201ENST00000393279 1427 ntBASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCHCR1Q8TD31 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 AC027612.3-201ENST00000413684 1047 ntBASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 GABARAPL3-202ENST00000624044 1851 ntBASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCHCR1Q8TD31 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CCHCR1Q8TD31 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms