Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.94■□□□□ 0.94
CFAP61Q8NHU2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP61Q8NHU2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.94■□□□□ 0.94
CFAP61Q8NHU2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 AC009237.3-201ENST00000393279 1427 ntBASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP61Q8NHU2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 AF106564.1-201ENST00000607058 2553 ntBASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP61Q8NHU2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP61Q8NHU2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 AC005224.4-201ENST00000583262 1652 ntBASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 AC027612.3-201ENST00000413684 1047 ntBASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 FEM1AP4-201ENST00000443167 1987 ntBASIC20.9■□□□□ 0.94
CFAP61Q8NHU2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
CFAP61Q8NHU2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.89■□□□□ 0.94
CFAP61Q8NHU2 AP006587.3-201ENST00000525742 1516 ntBASIC20.89■□□□□ 0.94
CFAP61Q8NHU2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CFAP61Q8NHU2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
CFAP61Q8NHU2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.89■□□□□ 0.93
CFAP61Q8NHU2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
CFAP61Q8NHU2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.89■□□□□ 0.93
CFAP61Q8NHU2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP61Q8NHU2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.89■□□□□ 0.93
CFAP61Q8NHU2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP61Q8NHU2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP61Q8NHU2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP61Q8NHU2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP61Q8NHU2 Z98882.1-201ENST00000622160 2253 ntBASIC20.88■□□□□ 0.93
CFAP61Q8NHU2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.88■□□□□ 0.93
CFAP61Q8NHU2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP61Q8NHU2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP61Q8NHU2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.88■□□□□ 0.93
CFAP61Q8NHU2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CFAP61Q8NHU2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CFAP61Q8NHU2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.88■□□□□ 0.93
CFAP61Q8NHU2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP61Q8NHU2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms