Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.17■■□□□ 1.145e-8■■□□□ 14.1
DDX59Q5T1V6 FOXP4-201ENST00000307972 3745 ntTSL 1 (best) BASIC11.4□□□□□ -0.585e-8■■□□□ 14.1
DDX59Q5T1V6 ARHGAP17-206ENST00000571406 1135 ntTSL 39.75□□□□□ -0.852e-21■■□□□ 14.1
DDX59Q5T1V6 SLC6A8-203ENST00000429147 334 ntTSL 215.13■□□□□ 0.017e-9■■□□□ 14
DDX59Q5T1V6 SLC6A8-208ENST00000467402 308 ntTSL 510.57□□□□□ -0.727e-9■■□□□ 14
DDX59Q5T1V6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.5■□□□□ 0.875e-13■■□□□ 14
DDX59Q5T1V6 PCMTD2-211ENST00000610196 476 ntTSL 316.04■□□□□ 0.165e-13■■□□□ 14
DDX59Q5T1V6 MGST2-203ENST00000503816 1780 ntTSL 515.73■□□□□ 0.115e-13■■□□□ 14
DDX59Q5T1V6 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.72□□□□□ -0.215e-13■■□□□ 14
DDX59Q5T1V6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.04□□□□□ -0.325e-13■■□□□ 14
DDX59Q5T1V6 PCMTD2-203ENST00000308824 3843 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.765e-13■■□□□ 14
DDX59Q5T1V6 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC8.22□□□□□ -1.095e-13■■□□□ 14
DDX59Q5T1V6 MGST2-206ENST00000515137 1013 ntTSL 1 (best)7.93□□□□□ -1.145e-13■■□□□ 14
DDX59Q5T1V6 PCMTD2-208ENST00000609764 572 ntTSL 45.32□□□□□ -1.565e-13■■□□□ 14
DDX59Q5T1V6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.393e-6■■□□□ 14
DDX59Q5T1V6 ARID3A-205ENST00000587532 1016 ntTSL 516.26■□□□□ 0.193e-6■■□□□ 14
DDX59Q5T1V6 ARID3A-202ENST00000457152 549 ntTSL 511.71□□□□□ -0.533e-6■■□□□ 14
DDX59Q5T1V6 PRDM2-209ENST00000491134 1100 ntTSL 316.83■□□□□ 0.283e-13■■□□□ 14
DDX59Q5T1V6 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC12.4□□□□□ -0.423e-13■■□□□ 14
DDX59Q5T1V6 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC11.58□□□□□ -0.563e-13■■□□□ 14
DDX59Q5T1V6 PRDM2-214ENST00000505823 568 ntTSL 1 (best) BASIC10.74□□□□□ -0.693e-13■■□□□ 14
DDX59Q5T1V6 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.25□□□□□ -1.093e-13■■□□□ 14
DDX59Q5T1V6 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.193e-13■■□□□ 14
DDX59Q5T1V6 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.393e-13■■□□□ 14
DDX59Q5T1V6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.42□□□□□ -1.543e-13■■□□□ 14
DDX59Q5T1V6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.61■□□□□ 0.737e-7■■□□□ 14
DDX59Q5T1V6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.32■□□□□ 0.042e-7■■□□□ 14
DDX59Q5T1V6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.393e-6■■□□□ 14
DDX59Q5T1V6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.283e-6■■□□□ 14
DDX59Q5T1V6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.263e-6■■□□□ 14
DDX59Q5T1V6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.193e-6■■□□□ 14
DDX59Q5T1V6 WASF1-204ENST00000392586 2815 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.733e-6■■□□□ 14
DDX59Q5T1V6 HM13-218ENST00000487281 757 ntTSL 314.02□□□□□ -0.172e-6■■□□□ 14
DDX59Q5T1V6 HM13-211ENST00000468559 675 ntTSL 511.47□□□□□ -0.572e-6■■□□□ 14
DDX59Q5T1V6 HM13-221ENST00000493364 372 ntTSL 210.73□□□□□ -0.692e-6■■□□□ 14
DDX59Q5T1V6 HM13-225ENST00000619859 455 ntTSL 36.05□□□□□ -1.442e-6■■□□□ 14
DDX59Q5T1V6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.514e-8■■□□□ 14
DDX59Q5T1V6 CSK-205ENST00000563894 1036 ntTSL 1 (best)17.69■□□□□ 0.424e-8■■□□□ 14
DDX59Q5T1V6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.284e-8■■□□□ 14
DDX59Q5T1V6 TCF3-213ENST00000590436 1149 ntTSL 518.45■□□□□ 0.544e-9■■□□□ 13.9
DDX59Q5T1V6 TCF3-206ENST00000585855 1170 ntTSL 318.45■□□□□ 0.544e-9■■□□□ 13.9
DDX59Q5T1V6 TCF3-219ENST00000610756 1343 ntTSL 1 (best)17.39■□□□□ 0.374e-9■■□□□ 13.9
DDX59Q5T1V6 TCF3-216ENST00000592395 996 ntTSL 516.9■□□□□ 0.34e-9■■□□□ 13.9
DDX59Q5T1V6 TCF3-207ENST00000586164 409 ntTSL 316.44■□□□□ 0.224e-9■■□□□ 13.9
DDX59Q5T1V6 TCF3-218ENST00000593064 2694 ntTSL 214.96□□□□□ -0.014e-9■■□□□ 13.9
DDX59Q5T1V6 TCF3-217ENST00000592628 1751 ntTSL 514.72□□□□□ -0.054e-9■■□□□ 13.9
DDX59Q5T1V6 TCF3-215ENST00000590684 1313 ntTSL 314.53□□□□□ -0.084e-9■■□□□ 13.9
DDX59Q5T1V6 TCF3-211ENST00000587425 629 ntTSL 213.61□□□□□ -0.234e-9■■□□□ 13.9
DDX59Q5T1V6 TCF3-205ENST00000585731 1222 ntTSL 212.34□□□□□ -0.434e-9■■□□□ 13.9
DDX59Q5T1V6 HAUS5-204ENST00000430749 526 ntTSL 28.7□□□□□ -1.022e-8■■□□□ 13.9
DDX59Q5T1V6 PSME2-204ENST00000558931 2754 ntTSL 514.2□□□□□ -0.142e-15■■□□□ 13.9
DDX59Q5T1V6 PSME2-203ENST00000558273 1502 ntTSL 213.78□□□□□ -0.22e-15■■□□□ 13.9
DDX59Q5T1V6 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.492e-15■■□□□ 13.9
DDX59Q5T1V6 ERF-206ENST00000596818 566 ntTSL 314.13□□□□□ -0.157e-7■■□□□ 13.9
DDX59Q5T1V6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.059e-7■■□□□ 13.9
DDX59Q5T1V6 CUL7-201ENST00000265348 5254 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.569e-7■■□□□ 13.9
DDX59Q5T1V6 CERS2-202ENST00000345896 2170 ntTSL 228.24■■■□□ 2.115e-6■■□□□ 13.9
DDX59Q5T1V6 CERS2-203ENST00000361419 997 ntTSL 227■■□□□ 1.915e-6■■□□□ 13.9
DDX59Q5T1V6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.845e-6■■□□□ 13.9
DDX59Q5T1V6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.65e-6■■□□□ 13.9
DDX59Q5T1V6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.55e-6■■□□□ 13.9
DDX59Q5T1V6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.55e-6■■□□□ 13.9
DDX59Q5T1V6 ZEB1-214ENST00000558863 1355 ntTSL 522.38■■□□□ 1.175e-6■■□□□ 13.9
DDX59Q5T1V6 CAPRIN1-203ENST00000526477 587 ntTSL 221.36■■□□□ 1.015e-6■■□□□ 13.9
DDX59Q5T1V6 CAPRIN1-205ENST00000528856 595 ntTSL 521.36■■□□□ 1.015e-6■■□□□ 13.9
DDX59Q5T1V6 KCTD13-201ENST00000308768 1685 ntTSL 220.51■□□□□ 0.875e-6■■□□□ 13.9
DDX59Q5T1V6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.1■□□□□ 0.815e-6■■□□□ 13.9
DDX59Q5T1V6 KCTD13-208ENST00000568721 589 ntTSL 220■□□□□ 0.795e-6■■□□□ 13.9
DDX59Q5T1V6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.765e-6■■□□□ 13.9
DDX59Q5T1V6 PPT2-EGFL8-207ENST00000585246 1051 ntAPPRIS ALT2 TSL 219.29■□□□□ 0.685e-6■■□□□ 13.9
DDX59Q5T1V6 SLC2A14-216ENST00000542782 682 ntTSL 219.25■□□□□ 0.675e-6■■□□□ 13.9
DDX59Q5T1V6 RGL3-210ENST00000566153 2149 ntTSL 219.18■□□□□ 0.665e-6■■□□□ 13.9
DDX59Q5T1V6 SLC2A14-210ENST00000537557 578 ntTSL 318.89■□□□□ 0.615e-6■■□□□ 13.9
DDX59Q5T1V6 KCTD13-206ENST00000566842 1860 ntTSL 218.82■□□□□ 0.65e-6■■□□□ 13.9
DDX59Q5T1V6 RGL3-206ENST00000562663 2303 ntTSL 517.6■□□□□ 0.415e-6■■□□□ 13.9
DDX59Q5T1V6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.52■□□□□ 0.45e-6■■□□□ 13.9
DDX59Q5T1V6 RGL3-203ENST00000453604 1455 ntTSL 217.51■□□□□ 0.395e-6■■□□□ 13.9
DDX59Q5T1V6 RGL3-217ENST00000589032 501 ntTSL 517.51■□□□□ 0.395e-6■■□□□ 13.9
DDX59Q5T1V6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.51■□□□□ 0.395e-6■■□□□ 13.9
DDX59Q5T1V6 PPT2-EGFL8-201ENST00000421600 999 ntAPPRIS ALT2 TSL 517.28■□□□□ 0.365e-6■■□□□ 13.9
DDX59Q5T1V6 RGL3-208ENST00000563726 2366 ntTSL 217.23■□□□□ 0.355e-6■■□□□ 13.9
DDX59Q5T1V6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.265e-6■■□□□ 13.9
DDX59Q5T1V6 SLC2A14-206ENST00000535344 561 ntTSL 416.21■□□□□ 0.195e-6■■□□□ 13.9
DDX59Q5T1V6 PPT2-EGFL8-206ENST00000583227 1540 ntAPPRIS ALT2 TSL 516.19■□□□□ 0.185e-6■■□□□ 13.9
DDX59Q5T1V6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.185e-6■■□□□ 13.9
DDX59Q5T1V6 PPT2-EGFL8-203ENST00000428388 2878 ntAPPRIS P5 TSL 215.9■□□□□ 0.145e-6■■□□□ 13.9
DDX59Q5T1V6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.135e-6■■□□□ 13.9
DDX59Q5T1V6 SLC2A14-207ENST00000535383 665 ntTSL 215.79■□□□□ 0.125e-6■■□□□ 13.9
DDX59Q5T1V6 PPT2-EGFL8-204ENST00000453656 1327 ntTSL 215.43■□□□□ 0.065e-6■■□□□ 13.9
DDX59Q5T1V6 ITPA-204ENST00000460550 967 ntTSL 215.15■□□□□ 0.025e-6■■□□□ 13.9
DDX59Q5T1V6 CAPRIN1-216ENST00000534042 574 ntTSL 514.96□□□□□ -0.015e-6■■□□□ 13.9
DDX59Q5T1V6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.85□□□□□ -0.035e-6■■□□□ 13.9
DDX59Q5T1V6 ITPA-208ENST00000483354 1028 ntTSL 314.85□□□□□ -0.035e-6■■□□□ 13.9
DDX59Q5T1V6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.7□□□□□ -0.065e-6■■□□□ 13.9
DDX59Q5T1V6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.075e-6■■□□□ 13.9
DDX59Q5T1V6 DEF6-202ENST00000444278 385 ntTSL 314.44□□□□□ -0.15e-6■■□□□ 13.9
DDX59Q5T1V6 ITPA-209ENST00000490838 977 ntTSL 214.4□□□□□ -0.15e-6■■□□□ 13.9
DDX59Q5T1V6 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.175e-6■■□□□ 13.9
DDX59Q5T1V6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.67□□□□□ -0.225e-6■■□□□ 13.9
DDX59Q5T1V6 ZEB1-218ENST00000560196 1014 ntTSL 1 (best)13.67□□□□□ -0.225e-6■■□□□ 13.9
Retrieved 100 of 7,289 protein–RNA pairs in 131.1 ms