Protein–RNA interactions for Protein: Q56UQ5

TPT1-like protein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q56UQ5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Q56UQ5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Q56UQ5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.45■□□□□ 0.22
Q56UQ5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.45■□□□□ 0.22
Q56UQ5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Q56UQ5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.45■□□□□ 0.22
Q56UQ5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.45■□□□□ 0.22
Q56UQ5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.45■□□□□ 0.22
Q56UQ5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.45■□□□□ 0.22
Q56UQ5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 AC005224.4-201ENST00000583262 1652 ntBASIC16.45■□□□□ 0.22
Q56UQ5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.45■□□□□ 0.22
Q56UQ5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Q56UQ5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.44■□□□□ 0.22
Q56UQ5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.44■□□□□ 0.22
Q56UQ5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Q56UQ5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.44■□□□□ 0.22
Q56UQ5 SUDS3P1-201ENST00000505831 966 ntBASIC16.44■□□□□ 0.22
Q56UQ5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.44■□□□□ 0.22
Q56UQ5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.44■□□□□ 0.22
Q56UQ5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.44■□□□□ 0.22
Q56UQ5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Q56UQ5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.44■□□□□ 0.22
Q56UQ5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.44■□□□□ 0.22
Q56UQ5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Q56UQ5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Q56UQ5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Q56UQ5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Q56UQ5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Q56UQ5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Q56UQ5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Q56UQ5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.43■□□□□ 0.22
Q56UQ5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.43■□□□□ 0.22
Q56UQ5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.43■□□□□ 0.22
Q56UQ5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Q56UQ5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Q56UQ5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.43■□□□□ 0.22
Q56UQ5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.43■□□□□ 0.22
Q56UQ5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.43■□□□□ 0.22
Q56UQ5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.43■□□□□ 0.22
Q56UQ5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Q56UQ5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Q56UQ5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Q56UQ5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.42■□□□□ 0.22
Q56UQ5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Q56UQ5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.42■□□□□ 0.22
Q56UQ5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Q56UQ5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.42■□□□□ 0.22
Q56UQ5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Q56UQ5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Q56UQ5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Q56UQ5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Q56UQ5 AC055733.4-201ENST00000638462 1354 ntBASIC16.42■□□□□ 0.22
Q56UQ5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Q56UQ5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Q56UQ5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Q56UQ5 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.42■□□□□ 0.22
Q56UQ5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Q56UQ5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Q56UQ5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.42■□□□□ 0.22
Q56UQ5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.42■□□□□ 0.22
Q56UQ5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Q56UQ5 AC012414.1-201ENST00000556676 535 ntBASIC16.42■□□□□ 0.22
Q56UQ5 AL354811.1-201ENST00000610286 706 ntBASIC16.42■□□□□ 0.22
Q56UQ5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.42■□□□□ 0.22
Q56UQ5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Q56UQ5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Q56UQ5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Q56UQ5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Q56UQ5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Q56UQ5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Q56UQ5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms