Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VSX2P58304 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VSX2P58304 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VSX2P58304 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VSX2P58304 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VSX2P58304 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VSX2P58304 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VSX2P58304 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VSX2P58304 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.91■□□□□ 0.78
VSX2P58304 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.91■□□□□ 0.78
VSX2P58304 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VSX2P58304 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VSX2P58304 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
VSX2P58304 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VSX2P58304 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.91■□□□□ 0.78
VSX2P58304 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VSX2P58304 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.91■□□□□ 0.78
VSX2P58304 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.91■□□□□ 0.78
VSX2P58304 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VSX2P58304 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VSX2P58304 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.91■□□□□ 0.78
VSX2P58304 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VSX2P58304 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.9■□□□□ 0.78
VSX2P58304 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VSX2P58304 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
VSX2P58304 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VSX2P58304 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.9■□□□□ 0.78
VSX2P58304 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
VSX2P58304 AC243732.1-201ENST00000612648 864 ntBASIC19.9■□□□□ 0.78
VSX2P58304 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
VSX2P58304 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VSX2P58304 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VSX2P58304 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.9■□□□□ 0.78
VSX2P58304 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VSX2P58304 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
VSX2P58304 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.9■□□□□ 0.78
VSX2P58304 Z98882.1-201ENST00000622160 2253 ntBASIC19.9■□□□□ 0.78
VSX2P58304 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.89■□□□□ 0.78
VSX2P58304 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
VSX2P58304 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VSX2P58304 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VSX2P58304 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VSX2P58304 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VSX2P58304 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VSX2P58304 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VSX2P58304 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VSX2P58304 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
VSX2P58304 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.89■□□□□ 0.77
VSX2P58304 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VSX2P58304 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.89■□□□□ 0.77
VSX2P58304 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
VSX2P58304 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.89■□□□□ 0.77
VSX2P58304 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
VSX2P58304 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
VSX2P58304 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
VSX2P58304 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VSX2P58304 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
VSX2P58304 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.88■□□□□ 0.77
VSX2P58304 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.88■□□□□ 0.77
VSX2P58304 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VSX2P58304 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VSX2P58304 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.88■□□□□ 0.77
VSX2P58304 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.88■□□□□ 0.77
VSX2P58304 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VSX2P58304 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.88■□□□□ 0.77
VSX2P58304 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.88■□□□□ 0.77
VSX2P58304 AC007322.4-201ENST00000509611 723 ntBASIC19.88■□□□□ 0.77
VSX2P58304 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.88■□□□□ 0.77
VSX2P58304 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VSX2P58304 AL050303.2-201ENST00000619798 666 ntBASIC19.88■□□□□ 0.77
VSX2P58304 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VSX2P58304 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.88■□□□□ 0.77
VSX2P58304 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
VSX2P58304 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VSX2P58304 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
VSX2P58304 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VSX2P58304 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VSX2P58304 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.87■□□□□ 0.77
VSX2P58304 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VSX2P58304 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VSX2P58304 AC068338.2-201ENST00000563278 1430 ntBASIC19.87■□□□□ 0.77
VSX2P58304 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.87■□□□□ 0.77
VSX2P58304 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VSX2P58304 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VSX2P58304 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VSX2P58304 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.87■□□□□ 0.77
VSX2P58304 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.87■□□□□ 0.77
VSX2P58304 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VSX2P58304 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.87■□□□□ 0.77
VSX2P58304 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.87■□□□□ 0.77
VSX2P58304 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.87■□□□□ 0.77
VSX2P58304 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VSX2P58304 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VSX2P58304 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VSX2P58304 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VSX2P58304 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VSX2P58304 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VSX2P58304 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
VSX2P58304 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.86■□□□□ 0.77
VSX2P58304 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms