Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CLDN12P56749 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN12P56749 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN12P56749 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN12P56749 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN12P56749 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN12P56749 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN12P56749 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN12P56749 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN12P56749 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN12P56749 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLDN12P56749 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CLDN12P56749 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN12P56749 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN12P56749 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN12P56749 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN12P56749 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN12P56749 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN12P56749 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CLDN12P56749 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CLDN12P56749 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN12P56749 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLDN12P56749 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN12P56749 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN12P56749 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.03■□□□□ 0.48
CLDN12P56749 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN12P56749 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLDN12P56749 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN12P56749 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN12P56749 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN12P56749 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN12P56749 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN12P56749 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLDN12P56749 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN12P56749 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN12P56749 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN12P56749 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN12P56749 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CLDN12P56749 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN12P56749 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLDN12P56749 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN12P56749 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN12P56749 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN12P56749 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN12P56749 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN12P56749 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN12P56749 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN12P56749 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN12P56749 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN12P56749 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN12P56749 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN12P56749 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.02■□□□□ 0.47
CLDN12P56749 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.02■□□□□ 0.47
CLDN12P56749 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN12P56749 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.02■□□□□ 0.47
CLDN12P56749 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.02■□□□□ 0.47
CLDN12P56749 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
CLDN12P56749 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN12P56749 AC087289.5-201ENST00000586076 3175 ntBASIC18.01■□□□□ 0.47
CLDN12P56749 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN12P56749 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN12P56749 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN12P56749 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN12P56749 AL512408.1-201ENST00000569378 2000 ntBASIC18.01■□□□□ 0.47
CLDN12P56749 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN12P56749 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN12P56749 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN12P56749 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN12P56749 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN12P56749 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CLDN12P56749 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CLDN12P56749 AL356740.2-201ENST00000601559 647 ntBASIC18.01■□□□□ 0.47
CLDN12P56749 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.01■□□□□ 0.47
CLDN12P56749 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN12P56749 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CLDN12P56749 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CLDN12P56749 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN12P56749 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN12P56749 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN12P56749 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN12P56749 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN12P56749 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN12P56749 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN12P56749 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN12P56749 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLDN12P56749 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN12P56749 SRD5A1P1-201ENST00000442297 786 ntBASIC18■□□□□ 0.47
CLDN12P56749 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN12P56749 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN12P56749 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18■□□□□ 0.47
CLDN12P56749 BID-203ENST00000399765 1879 ntTSL 2 BASIC18■□□□□ 0.47
CLDN12P56749 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN12P56749 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLDN12P56749 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18■□□□□ 0.47
CLDN12P56749 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN12P56749 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN12P56749 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN12P56749 FP700111.2-201ENST00000619190 1892 ntBASIC17.99■□□□□ 0.47
CLDN12P56749 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN12P56749 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms