Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC30.05■■■□□ 2.4
CLTCL1P53675 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CLTCL1P53675 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
CLTCL1P53675 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
CLTCL1P53675 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
CLTCL1P53675 AC087633.2-202ENST00000565166 1439 ntBASIC30.05■■■□□ 2.4
CLTCL1P53675 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CLTCL1P53675 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC30.04■■■□□ 2.4
CLTCL1P53675 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CLTCL1P53675 RHOD-202ENST00000532559 538 ntTSL 3 BASIC30.04■■■□□ 2.4
CLTCL1P53675 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CLTCL1P53675 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CLTCL1P53675 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
CLTCL1P53675 USP36-216ENST00000589424 970 ntTSL 5 BASIC30.04■■■□□ 2.4
CLTCL1P53675 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC30.03■■■□□ 2.4
CLTCL1P53675 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC30.03■■■□□ 2.4
CLTCL1P53675 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC30.03■■■□□ 2.4
CLTCL1P53675 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CLTCL1P53675 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CLTCL1P53675 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CLTCL1P53675 AC242852.2-201ENST00000615738 1807 ntBASIC30.03■■■□□ 2.4
CLTCL1P53675 TERT-206ENST00000508104 2486 ntTSL 5 BASIC30.03■■■□□ 2.4
CLTCL1P53675 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CLTCL1P53675 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CLTCL1P53675 UNC93B4-201ENST00000505679 747 ntBASIC30.03■■■□□ 2.4
CLTCL1P53675 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CLTCL1P53675 AC069544.1-201ENST00000609399 999 ntBASIC30.03■■■□□ 2.4
CLTCL1P53675 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CLTCL1P53675 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CLTCL1P53675 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CLTCL1P53675 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC30.03■■■□□ 2.4
CLTCL1P53675 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CLTCL1P53675 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CLTCL1P53675 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CLTCL1P53675 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CLTCL1P53675 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
CLTCL1P53675 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC30.01■■■□□ 2.39
CLTCL1P53675 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CLTCL1P53675 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CLTCL1P53675 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CLTCL1P53675 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CLTCL1P53675 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CLTCL1P53675 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC30.01■■■□□ 2.39
CLTCL1P53675 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
CLTCL1P53675 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC30.01■■■□□ 2.39
CLTCL1P53675 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
CLTCL1P53675 AC092368.3-202ENST00000574180 1591 ntBASIC30.01■■■□□ 2.39
CLTCL1P53675 AL359736.2-201ENST00000621992 437 ntBASIC30.01■■■□□ 2.39
CLTCL1P53675 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
CLTCL1P53675 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC30■■■□□ 2.39
CLTCL1P53675 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC30■■■□□ 2.39
CLTCL1P53675 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CLTCL1P53675 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC30■■■□□ 2.39
CLTCL1P53675 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
CLTCL1P53675 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC30■■■□□ 2.39
CLTCL1P53675 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC30■■■□□ 2.39
CLTCL1P53675 GALC-202ENST00000393568 2054 ntTSL 2 BASIC30■■■□□ 2.39
CLTCL1P53675 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC30■■■□□ 2.39
CLTCL1P53675 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CLTCL1P53675 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC30■■■□□ 2.39
CLTCL1P53675 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC30■■■□□ 2.39
CLTCL1P53675 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC30■■■□□ 2.39
CLTCL1P53675 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC29.99■■■□□ 2.39
CLTCL1P53675 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
CLTCL1P53675 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC29.99■■■□□ 2.39
CLTCL1P53675 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CLTCL1P53675 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CLTCL1P53675 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CLTCL1P53675 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CLTCL1P53675 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC29.99■■■□□ 2.39
CLTCL1P53675 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC29.99■■■□□ 2.39
CLTCL1P53675 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CLTCL1P53675 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CLTCL1P53675 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC29.98■■■□□ 2.39
CLTCL1P53675 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
CLTCL1P53675 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CLTCL1P53675 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
CLTCL1P53675 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
CLTCL1P53675 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC29.98■■■□□ 2.39
CLTCL1P53675 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CLTCL1P53675 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC29.98■■■□□ 2.39
CLTCL1P53675 SOX15-203ENST00000570788 1093 ntBASIC29.98■■■□□ 2.39
CLTCL1P53675 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CLTCL1P53675 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CLTCL1P53675 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
CLTCL1P53675 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CLTCL1P53675 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC29.97■■■□□ 2.39
CLTCL1P53675 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC29.97■■■□□ 2.39
CLTCL1P53675 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC29.97■■■□□ 2.39
CLTCL1P53675 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC29.97■■■□□ 2.39
CLTCL1P53675 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CLTCL1P53675 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC29.97■■■□□ 2.39
CLTCL1P53675 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CLTCL1P53675 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC29.97■■■□□ 2.39
CLTCL1P53675 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CLTCL1P53675 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CLTCL1P53675 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC29.97■■■□□ 2.39
CLTCL1P53675 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
CLTCL1P53675 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC29.96■■■□□ 2.39
CLTCL1P53675 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms