Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 ABCF1-201ENST00000326195 3481 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.584e-6■■■□□ 17.5
AARSP49588 PUM1-215ENST00000525948 1103 ntTSL 311.1□□□□□ -0.632e-7■■■□□ 17.5
AARSP49588 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.642e-7■■■□□ 17.5
AARSP49588 TNIP1-209ENST00000521001 575 ntTSL 410.91□□□□□ -0.664e-6■■■□□ 17.5
AARSP49588 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.724e-6■■■□□ 17.5
AARSP49588 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC10.24□□□□□ -0.774e-6■■■□□ 17.5
AARSP49588 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC10.18□□□□□ -0.784e-6■■■□□ 17.5
AARSP49588 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.814e-6■■■□□ 17.5
AARSP49588 ABCF1-203ENST00000441867 1074 ntTSL 59.98□□□□□ -0.814e-6■■■□□ 17.5
AARSP49588 RPL3-204ENST00000420536 711 ntTSL 59.96□□□□□ -0.828e-10■■■□□ 17.5
AARSP49588 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.854e-6■■■□□ 17.5
AARSP49588 HSP90AB2P-202ENST00000602906 1277 ntTSL 1 (best) BASIC9.71□□□□□ -0.861e-8■■■□□ 17.5
AARSP49588 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.894e-6■■■□□ 17.5
AARSP49588 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC9.45□□□□□ -0.92e-7■■■□□ 17.5
AARSP49588 MACF1-216ENST00000476350 5304 ntTSL 29.39□□□□□ -0.912e-7■■■□□ 17.5
AARSP49588 HIP1-206ENST00000485723 419 ntTSL 29.35□□□□□ -0.914e-6■■■□□ 17.5
AARSP49588 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC9.29□□□□□ -0.924e-6■■■□□ 17.5
AARSP49588 ADGRV1-206ENST00000507314 698 ntTSL 39.29□□□□□ -0.924e-6■■■□□ 17.5
AARSP49588 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC9.27□□□□□ -0.934e-6■■■□□ 17.5
AARSP49588 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.934e-6■■■□□ 17.5
AARSP49588 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.942e-7■■■□□ 17.5
AARSP49588 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.84□□□□□ -0.991e-8■■■□□ 17.5
AARSP49588 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.024e-6■■■□□ 17.5
AARSP49588 MAP4K4-209ENST00000421882 3416 ntTSL 58.67□□□□□ -1.024e-6■■■□□ 17.5
AARSP49588 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.62□□□□□ -1.034e-6■■■□□ 17.5
AARSP49588 PUM1-223ENST00000532678 793 ntTSL 48.62□□□□□ -1.032e-7■■■□□ 17.5
AARSP49588 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.43□□□□□ -1.064e-6■■■□□ 17.5
AARSP49588 AC135048.1-202ENST00000562642 626 ntTSL 38.38□□□□□ -1.072e-7■■■□□ 17.5
AARSP49588 MAP4K4-214ENST00000477711 606 ntTSL 28.29□□□□□ -1.084e-6■■■□□ 17.5
AARSP49588 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.26□□□□□ -1.092e-7■■■□□ 17.5
AARSP49588 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.14e-6■■■□□ 17.5
AARSP49588 PUM1-214ENST00000525843 4528 ntTSL 57.82□□□□□ -1.162e-7■■■□□ 17.5
AARSP49588 MACF1-229ENST00000530262 6257 ntTSL 57.7□□□□□ -1.182e-7■■■□□ 17.5
AARSP49588 ADGRV1-233ENST00000640407 5673 ntTSL 57.67□□□□□ -1.184e-6■■■□□ 17.5
AARSP49588 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.65□□□□□ -1.184e-6■■■□□ 17.5
AARSP49588 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.51□□□□□ -1.214e-6■■■□□ 17.5
AARSP49588 ADGRV1-202ENST00000425867 8141 ntTSL 57.5□□□□□ -1.214e-6■■■□□ 17.5
AARSP49588 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.5□□□□□ -1.212e-7■■■□□ 17.5
AARSP49588 LSM8-202ENST00000411938 290 ntTSL 37.46□□□□□ -1.224e-6■■■□□ 17.5
AARSP49588 PUM1-211ENST00000498419 3068 ntTSL 57.38□□□□□ -1.232e-7■■■□□ 17.5
AARSP49588 ADGRV1-214ENST00000638975 2467 ntTSL 57.35□□□□□ -1.234e-6■■■□□ 17.5
AARSP49588 TNRC6A-207ENST00000491718 7956 ntTSL 1 (best)7.33□□□□□ -1.248e-10■■■□□ 17.5
AARSP49588 PUM1-218ENST00000526215 586 ntTSL 27.28□□□□□ -1.242e-7■■■□□ 17.5
AARSP49588 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.264e-6■■■□□ 17.5
AARSP49588 AP1G1-211ENST00000565642 2794 ntTSL 57.16□□□□□ -1.264e-6■■■□□ 17.5
AARSP49588 RPL7A-208ENST00000492798 374 ntTSL 1 (best)6.81□□□□□ -1.328e-48■■■□□ 17.5
AARSP49588 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.332e-7■■■□□ 17.5
AARSP49588 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.74□□□□□ -1.332e-7■■■□□ 17.5
AARSP49588 MAP4K4-207ENST00000417294 4251 ntTSL 56.74□□□□□ -1.334e-6■■■□□ 17.5
AARSP49588 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.364e-6■■■□□ 17.5
AARSP49588 WDR70-207ENST00000511906 5716 ntTSL 26.07□□□□□ -1.444e-6■■■□□ 17.5
AARSP49588 ADGRV1-217ENST00000639431 611 ntTSL 55.98□□□□□ -1.454e-6■■■□□ 17.5
AARSP49588 ADGRV1-211ENST00000638510 6503 ntTSL 1 (best)5.88□□□□□ -1.474e-6■■■□□ 17.5
AARSP49588 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.484e-6■■■□□ 17.5
AARSP49588 RPL31-211ENST00000456292 357 ntTSL 25.8□□□□□ -1.482e-7■■■□□ 17.5
AARSP49588 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.544e-6■■■□□ 17.5
AARSP49588 ADGRV1-212ENST00000638585 631 ntTSL 54.9□□□□□ -1.634e-6■■■□□ 17.5
AARSP49588 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.84e-6■■■□□ 17.5
AARSP49588 AP1G1-213ENST00000566179 562 ntTSL 53.16□□□□□ -1.94e-6■■■□□ 17.5
AARSP49588 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.194e-6■■■□□ 17.5
AARSP49588 SNORD36C-201ENST00000516733 66 ntBASIC1.25□□□□□ -2.218e-48■■■□□ 17.5
AARSP49588 SNORD71-201ENST00000411292 86 ntBASIC0.48□□□□□ -2.334e-6■■■□□ 17.5
AARSP49588 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.344e-6■■■□□ 17.5
AARSP49588 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.061e-6■■■□□ 17.4
AARSP49588 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.981e-6■■■□□ 17.4
AARSP49588 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.761e-6■■■□□ 17.4
AARSP49588 ISYNA1-204ENST00000577916 2148 ntTSL 527.32■■□□□ 1.961e-6■■■□□ 17.4
AARSP49588 ISYNA1-211ENST00000582811 2039 ntTSL 223.71■■□□□ 1.391e-6■■■□□ 17.4
AARSP49588 ISYNA1-213ENST00000583534 629 ntTSL 1 (best)22.13■■□□□ 1.131e-6■■■□□ 17.4
AARSP49588 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 11e-6■■■□□ 17.4
AARSP49588 ISYNA1-205ENST00000578352 592 ntTSL 220.5■□□□□ 0.871e-6■■■□□ 17.4
AARSP49588 ISYNA1-210ENST00000582770 1654 ntTSL 218.77■□□□□ 0.61e-6■■■□□ 17.4
AARSP49588 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.61■□□□□ 0.571e-6■■■□□ 17.4
AARSP49588 ISYNA1-208ENST00000581800 627 ntTSL 417.29■□□□□ 0.361e-6■■■□□ 17.4
AARSP49588 ISYNA1-203ENST00000577820 1466 ntTSL 515.5■□□□□ 0.071e-6■■■□□ 17.4
AARSP49588 MT-TH-201ENST00000387441 69 ntBASIC4.22□□□□□ -1.731e-323■■■□□ 17.3
AARSP49588 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.522e-6■■■□□ 17.3
AARSP49588 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.172e-6■■■□□ 17.3
AARSP49588 FAM178B-202ENST00000470789 722 ntTSL 1 (best)12.33□□□□□ -0.442e-6■■■□□ 17.3
AARSP49588 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.56■■□□□ 1.688e-7■■■□□ 17.3
AARSP49588 GNB1-207ENST00000472614 708 ntTSL 224.62■■□□□ 1.538e-7■■■□□ 17.3
AARSP49588 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.348e-7■■■□□ 17.3
AARSP49588 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.928e-7■■■□□ 17.3
AARSP49588 GNB1-202ENST00000434686 684 ntTSL 311.08□□□□□ -0.648e-7■■■□□ 17.3
AARSP49588 GNB1-204ENST00000439272 602 ntTSL 510.29□□□□□ -0.768e-7■■■□□ 17.3
AARSP49588 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.14e-6■■■□□ 17.3
AARSP49588 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.084e-6■■■□□ 17.3
AARSP49588 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.014e-6■■■□□ 17.3
AARSP49588 HOXB7-203ENST00000567101 528 ntTSL 210.98□□□□□ -0.652e-8■■■□□ 17.2
AARSP49588 TMC6-221ENST00000592063 743 ntTSL 515.15■□□□□ 0.027e-7■■■□□ 17.2
AARSP49588 TTC13-205ENST00000481976 1062 ntTSL 525.19■■□□□ 1.621e-7■■■□□ 17.2
AARSP49588 TTC13-209ENST00000522821 558 ntTSL 425.19■■□□□ 1.621e-7■■■□□ 17.2
AARSP49588 AHNAK-207ENST00000531324 579 ntAPPRIS ALT2 TSL 320.23■□□□□ 0.831e-7■■■□□ 17.2
AARSP49588 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.621e-7■■■□□ 17.2
AARSP49588 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.551e-7■■■□□ 17.2
AARSP49588 ZHX1-C8orf76-202ENST00000622816 581 ntAPPRIS ALT2 TSL 417.87■□□□□ 0.451e-7■■■□□ 17.2
AARSP49588 TMEM168-204ENST00000447395 1291 ntTSL 217.81■□□□□ 0.441e-7■■■□□ 17.2
AARSP49588 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.331e-7■■■□□ 17.2
AARSP49588 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.21e-7■■■□□ 17.2
AARSP49588 AHNAK-206ENST00000530285 580 ntAPPRIS ALT2 TSL 314.77□□□□□ -0.051e-7■■■□□ 17.2
Retrieved 100 of 8,200 protein–RNA pairs in 78.2 ms