RNA–Protein interactions for RNA: ENST00000562642.1

AC135048.1-202, humanhuman

TSL 3

Gene AC135048.1, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC135048.1-202ENST00000562642 AEBP2Q6ZN18 517 aaPredicted RBP26.05■■□□□ 1.76
AC135048.1-202ENST00000562642 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
AC135048.1-202ENST00000562642 SENP3Q9H4L4 574 aaPredicted RBP22.26■■□□□ 1.15
AC135048.1-202ENST00000562642 PHF23Q9BUL5 403 aaPredicted RBP21.94■■□□□ 1.1
AC135048.1-202ENST00000562642 FOXD1Q16676 465 aa20.77■□□□□ 0.92
AC135048.1-202ENST00000562642 PLPPR3Q6T4P5 718 aa19.54■□□□□ 0.72
AC135048.1-202ENST00000562642 MSH5O43196 834 aa19.53■□□□□ 0.72
AC135048.1-202ENST00000562642 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
AC135048.1-202ENST00000562642 PIAS4Q8N2W9 510 aaPredicted RBP19.31■□□□□ 0.68
AC135048.1-202ENST00000562642 PPP6R1Q9UPN7 881 aa19.26■□□□□ 0.67
AC135048.1-202ENST00000562642 ADRA2BP18089 450 aa19.15■□□□□ 0.66
AC135048.1-202ENST00000562642 NISCHQ9Y2I1 1504 aa18.82■□□□□ 0.6
AC135048.1-202ENST00000562642 MAPK8IP2Q13387 824 aaPredicted RBP17.65■□□□□ 0.42
AC135048.1-202ENST00000562642 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
AC135048.1-202ENST00000562642 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
AC135048.1-202ENST00000562642 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
AC135048.1-202ENST00000562642 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
AC135048.1-202ENST00000562642 CCDC180Q9P1Z9 1646 aa16.94■□□□□ 0.3
AC135048.1-202ENST00000562642 CNKSR2Q8WXI2 1034 aa16.84■□□□□ 0.29
AC135048.1-202ENST00000562642 CACNB1Q02641 598 aaPredicted RBP16.8■□□□□ 0.28
AC135048.1-202ENST00000562642 ABCC9O60706 1549 aa16.77■□□□□ 0.28
AC135048.1-202ENST00000562642 DCAF8L1A6NGE4 600 aa16.77■□□□□ 0.28
AC135048.1-202ENST00000562642 RNF216Q9NWF9 866 aaPredicted RBP16.75■□□□□ 0.27
AC135048.1-202ENST00000562642 RNF39Q9H2S5 420 aa16.65■□□□□ 0.26
AC135048.1-202ENST00000562642 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
AC135048.1-202ENST00000562642 C1QBPQ07021 282 aaKnown RBP16.41■□□□□ 0.22
AC135048.1-202ENST00000562642 NCBP3Q53F19 620 aaKnown RBP16.37■□□□□ 0.21
AC135048.1-202ENST00000562642 NPM3O75607 178 aaKnown RBP16.13■□□□□ 0.17
AC135048.1-202ENST00000562642 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
AC135048.1-202ENST00000562642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.03■□□□□ 0.16
AC135048.1-202ENST00000562642 NACADO15069 1562 aa15.96■□□□□ 0.14
AC135048.1-202ENST00000562642 DCAF8L2P0C7V8 631 aa15.84■□□□□ 0.13
AC135048.1-202ENST00000562642 UNC13AQ9UPW8 1703 aa15.79■□□□□ 0.12
AC135048.1-202ENST00000562642 MYO15BQ96JP2 1530 aa15.76■□□□□ 0.11
AC135048.1-202ENST00000562642 U3KPZ7 1027 aaPredicted RBP15.73■□□□□ 0.11
AC135048.1-202ENST00000562642 ZCCHC6Q5VYS8 1495 aaKnown RBP15.68■□□□□ 0.1
AC135048.1-202ENST00000562642 KCNA4P22459 653 aa15.63■□□□□ 0.09
AC135048.1-202ENST00000562642 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.09
AC135048.1-202ENST00000562642 DCAF1Q9Y4B6 1507 aa15.54■□□□□ 0.08
AC135048.1-202ENST00000562642 PABPN1Q86U42 306 aaKnown RBP eCLIP15.53■□□□□ 0.08
AC135048.1-202ENST00000562642 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
AC135048.1-202ENST00000562642 DSG3P32926 999 aa15.51■□□□□ 0.07
AC135048.1-202ENST00000562642 SLC4A2P04920 1241 aa15.48■□□□□ 0.07
AC135048.1-202ENST00000562642 CAPN15O75808 1086 aa15.47■□□□□ 0.07
AC135048.1-202ENST00000562642 SHROOM4Q9ULL8 1493 aa15.45■□□□□ 0.06
AC135048.1-202ENST00000562642 SCRIBQ14160 1630 aa15.33■□□□□ 0.04
AC135048.1-202ENST00000562642 APLP2Q06481 763 aa15.28■□□□□ 0.04
AC135048.1-202ENST00000562642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
AC135048.1-202ENST00000562642 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
AC135048.1-202ENST00000562642 CC2D2AQ9P2K1 1620 aa15.23■□□□□ 0.03
AC135048.1-202ENST00000562642 ZNF219Q9P2Y4 722 aaPredicted RBP15.21■□□□□ 0.03
AC135048.1-202ENST00000562642 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
AC135048.1-202ENST00000562642 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
AC135048.1-202ENST00000562642 CECR2Q9BXF3 1484 aa15.14■□□□□ 0.01
AC135048.1-202ENST00000562642 SAMD1Q6SPF0 538 aaPredicted RBP15.13■□□□□ 0.01
AC135048.1-202ENST00000562642 POTEHQ6S545 545 aa15.12■□□□□ 0.01
AC135048.1-202ENST00000562642 ABCB7O75027 752 aa15.08■□□□□ 0
AC135048.1-202ENST00000562642 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
AC135048.1-202ENST00000562642 RBM42Q9BTD8 480 aaKnown RBP14.8□□□□□ -0.04
AC135048.1-202ENST00000562642 POLA2Q14181 598 aa14.77□□□□□ -0.05
AC135048.1-202ENST00000562642 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
AC135048.1-202ENST00000562642 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
AC135048.1-202ENST00000562642 FOXD4L1Q9NU39 408 aa14.66□□□□□ -0.06
AC135048.1-202ENST00000562642 SMARCA4P51532 1647 aa14.63□□□□□ -0.07
AC135048.1-202ENST00000562642 SMARCA2P51531 1590 aa14.63□□□□□ -0.07
AC135048.1-202ENST00000562642 HMGXB3Q12766 1538 aa14.62□□□□□ -0.07
AC135048.1-202ENST00000562642 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
AC135048.1-202ENST00000562642 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
AC135048.1-202ENST00000562642 ATF5Q9Y2D1 282 aaPredicted RBP14.58□□□□□ -0.08
AC135048.1-202ENST00000562642 CUX2O14529 1486 aa14.57□□□□□ -0.08
AC135048.1-202ENST00000562642 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
AC135048.1-202ENST00000562642 PEG3Q9GZU2 1588 aa14.54□□□□□ -0.08
AC135048.1-202ENST00000562642 CHRDL2Q6WN34 429 aa14.53□□□□□ -0.08
AC135048.1-202ENST00000562642 MROH2BQ7Z745 1585 aa14.51□□□□□ -0.09
AC135048.1-202ENST00000562642 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
AC135048.1-202ENST00000562642 ZBTB12Q9Y330 459 aaPredicted RBP14.49□□□□□ -0.09
AC135048.1-202ENST00000562642 BAZ1BQ9UIG0 1483 aaKnown RBP14.47□□□□□ -0.09
AC135048.1-202ENST00000562642 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
AC135048.1-202ENST00000562642 LAMC3Q9Y6N6 1575 aa14.41□□□□□ -0.1
AC135048.1-202ENST00000562642 NESP48681 1621 aa14.4□□□□□ -0.1
AC135048.1-202ENST00000562642 ZBTB22O15209 634 aa14.38□□□□□ -0.11
AC135048.1-202ENST00000562642 THOC2Q8NI27 1593 aaKnown RBP14.37□□□□□ -0.11
AC135048.1-202ENST00000562642 WIZO95785 1651 aa14.35□□□□□ -0.11
AC135048.1-202ENST00000562642 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.11
AC135048.1-202ENST00000562642 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
AC135048.1-202ENST00000562642 ATXN8OSP0DMR3 200 aa14.3□□□□□ -0.12
AC135048.1-202ENST00000562642 REM2Q8IYK8 340 aaPredicted RBP14.27□□□□□ -0.13
AC135048.1-202ENST00000562642 OSCARQ8IYS5 282 aa14.27□□□□□ -0.13
AC135048.1-202ENST00000562642 PDS5BQ9NTI5 1447 aa14.26□□□□□ -0.13
AC135048.1-202ENST00000562642 TOP2AP11388 1531 aaKnown RBP14.21□□□□□ -0.13
AC135048.1-202ENST00000562642 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
AC135048.1-202ENST00000562642 MRC2Q9UBG0 1479 aa14.15□□□□□ -0.14
AC135048.1-202ENST00000562642 PIP4P2Q8N4L2 257 aa14.15□□□□□ -0.14
AC135048.1-202ENST00000562642 WDR62O43379 1518 aa14.15□□□□□ -0.14
AC135048.1-202ENST00000562642 PITPNM1O00562 1244 aa14.11□□□□□ -0.15
AC135048.1-202ENST00000562642 PRDM2Q13029 1718 aa14.1□□□□□ -0.15
AC135048.1-202ENST00000562642 SP7Q8TDD2 431 aaPredicted RBP14.09□□□□□ -0.15
AC135048.1-202ENST00000562642 CEP164Q9UPV0 1460 aa14.08□□□□□ -0.16
AC135048.1-202ENST00000562642 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
AC135048.1-202ENST00000562642 CFTRP13569 1480 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms