Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL13AP40429 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.35□□□□□ -0.11
RPL13AP40429 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPL13AP40429 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.35□□□□□ -0.11
RPL13AP40429 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPL13AP40429 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.35□□□□□ -0.11
RPL13AP40429 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
RPL13AP40429 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RPL13AP40429 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL13AP40429 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL13AP40429 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.34□□□□□ -0.11
RPL13AP40429 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL13AP40429 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.34□□□□□ -0.11
RPL13AP40429 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RPL13AP40429 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RPL13AP40429 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPL13AP40429 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL13AP40429 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPL13AP40429 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.34□□□□□ -0.11
RPL13AP40429 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPL13AP40429 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RPL13AP40429 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.34□□□□□ -0.11
RPL13AP40429 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL13AP40429 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL13AP40429 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL13AP40429 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL13AP40429 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RPL13AP40429 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RPL13AP40429 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL13AP40429 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RPL13AP40429 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
RPL13AP40429 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RPL13AP40429 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RPL13AP40429 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RPL13AP40429 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC14.33□□□□□ -0.12
RPL13AP40429 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.33□□□□□ -0.12
RPL13AP40429 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
RPL13AP40429 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.33□□□□□ -0.12
RPL13AP40429 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.33□□□□□ -0.12
RPL13AP40429 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.33□□□□□ -0.12
RPL13AP40429 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.33□□□□□ -0.12
RPL13AP40429 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.33□□□□□ -0.12
RPL13AP40429 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC14.33□□□□□ -0.12
RPL13AP40429 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.33□□□□□ -0.12
RPL13AP40429 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RPL13AP40429 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RPL13AP40429 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RPL13AP40429 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RPL13AP40429 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL13AP40429 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RPL13AP40429 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.32□□□□□ -0.12
RPL13AP40429 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC14.32□□□□□ -0.12
RPL13AP40429 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.32□□□□□ -0.12
RPL13AP40429 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
RPL13AP40429 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC14.32□□□□□ -0.12
RPL13AP40429 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
RPL13AP40429 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC14.32□□□□□ -0.12
RPL13AP40429 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL13AP40429 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RPL13AP40429 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.31□□□□□ -0.12
RPL13AP40429 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL13AP40429 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms