Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
PTPN6P29350 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
PTPN6P29350 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN6P29350 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN6P29350 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPN6P29350 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN6P29350 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN6P29350 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PTPN6P29350 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PTPN6P29350 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN6P29350 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PTPN6P29350 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN6P29350 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN6P29350 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN6P29350 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN6P29350 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN6P29350 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN6P29350 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN6P29350 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.72■□□□□ 0.75
PTPN6P29350 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN6P29350 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN6P29350 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN6P29350 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN6P29350 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN6P29350 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN6P29350 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.72■□□□□ 0.75
PTPN6P29350 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPN6P29350 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN6P29350 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN6P29350 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PTPN6P29350 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
PTPN6P29350 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PTPN6P29350 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPN6P29350 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN6P29350 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PTPN6P29350 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN6P29350 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PTPN6P29350 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN6P29350 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PTPN6P29350 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN6P29350 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN6P29350 AC121338.2-201ENST00000622535 1744 ntBASIC19.71■□□□□ 0.75
PTPN6P29350 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN6P29350 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPN6P29350 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN6P29350 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN6P29350 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PTPN6P29350 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPN6P29350 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PTPN6P29350 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.7■□□□□ 0.74
PTPN6P29350 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN6P29350 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PTPN6P29350 BX005040.4-201ENST00000637145 1518 ntBASIC19.7■□□□□ 0.74
PTPN6P29350 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN6P29350 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN6P29350 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN6P29350 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN6P29350 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN6P29350 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PTPN6P29350 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PTPN6P29350 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.69■□□□□ 0.74
PTPN6P29350 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.69■□□□□ 0.74
PTPN6P29350 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.69■□□□□ 0.74
PTPN6P29350 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PTPN6P29350 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.69■□□□□ 0.74
PTPN6P29350 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN6P29350 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN6P29350 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PTPN6P29350 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN6P29350 LINC02228-203ENST00000641970 1355 ntBASIC19.69■□□□□ 0.74
PTPN6P29350 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PTPN6P29350 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PTPN6P29350 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN6P29350 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN6P29350 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN6P29350 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN6P29350 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN6P29350 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN6P29350 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN6P29350 TPRG1LP1-201ENST00000598702 760 ntBASIC19.68■□□□□ 0.74
PTPN6P29350 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PTPN6P29350 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN6P29350 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN6P29350 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PTPN6P29350 AC027702.1-201ENST00000563810 1770 ntBASIC19.67■□□□□ 0.74
PTPN6P29350 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
PTPN6P29350 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PTPN6P29350 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PTPN6P29350 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN6P29350 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PTPN6P29350 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN6P29350 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.67■□□□□ 0.74
PTPN6P29350 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN6P29350 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PTPN6P29350 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.67■□□□□ 0.74
PTPN6P29350 AC034268.1-201ENST00000441047 882 ntBASIC19.67■□□□□ 0.74
PTPN6P29350 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN6P29350 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN6P29350 CCDC92B-201ENST00000575506 885 ntBASIC19.67■□□□□ 0.74
PTPN6P29350 TERF1P2-201ENST00000583350 1212 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms