Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TPRP12270 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TPRP12270 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPRP12270 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TPRP12270 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.69■□□□□ 0.74
TPRP12270 AP000550.4-202ENST00000639755 178 ntBASIC19.69■□□□□ 0.74
TPRP12270 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TPRP12270 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPRP12270 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TPRP12270 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPRP12270 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TPRP12270 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.69■□□□□ 0.74
TPRP12270 CYP2D8P-201ENST00000433633 1490 ntBASIC19.69■□□□□ 0.74
TPRP12270 AC027702.1-201ENST00000563810 1770 ntBASIC19.68■□□□□ 0.74
TPRP12270 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPRP12270 RBM17P1-201ENST00000453646 1190 ntBASIC19.68■□□□□ 0.74
TPRP12270 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
TPRP12270 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.68■□□□□ 0.74
TPRP12270 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.68■□□□□ 0.74
TPRP12270 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPRP12270 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPRP12270 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPRP12270 KRASP1-201ENST00000407852 552 ntBASIC19.68■□□□□ 0.74
TPRP12270 AK4P3-201ENST00000418260 669 ntBASIC19.68■□□□□ 0.74
TPRP12270 HCG4P8-203ENST00000443049 980 ntBASIC19.68■□□□□ 0.74
TPRP12270 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.68■□□□□ 0.74
TPRP12270 AC010947.1-201ENST00000623454 693 ntBASIC19.68■□□□□ 0.74
TPRP12270 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPRP12270 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.67■□□□□ 0.74
TPRP12270 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TPRP12270 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TPRP12270 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPRP12270 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TPRP12270 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TPRP12270 AC079598.2-202ENST00000546624 1451 ntBASIC19.67■□□□□ 0.74
TPRP12270 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TPRP12270 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPRP12270 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.67■□□□□ 0.74
TPRP12270 NUDT16P1-203ENST00000513809 620 ntBASIC19.67■□□□□ 0.74
TPRP12270 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
TPRP12270 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPRP12270 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.67■□□□□ 0.74
TPRP12270 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TPRP12270 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.67■□□□□ 0.74
TPRP12270 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.67■□□□□ 0.74
TPRP12270 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.67■□□□□ 0.74
TPRP12270 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.67■□□□□ 0.74
TPRP12270 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TPRP12270 KRT8P10-201ENST00000450021 1447 ntBASIC19.66■□□□□ 0.74
TPRP12270 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPRP12270 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPRP12270 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.66■□□□□ 0.74
TPRP12270 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPRP12270 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.66■□□□□ 0.74
TPRP12270 AL390955.1-201ENST00000428694 934 ntBASIC19.66■□□□□ 0.74
TPRP12270 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.66■□□□□ 0.74
TPRP12270 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TPRP12270 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.66■□□□□ 0.74
TPRP12270 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.66■□□□□ 0.74
TPRP12270 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPRP12270 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TPRP12270 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.66■□□□□ 0.74
TPRP12270 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TPRP12270 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TPRP12270 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
TPRP12270 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.65■□□□□ 0.74
TPRP12270 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.65■□□□□ 0.74
TPRP12270 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TPRP12270 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TPRP12270 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.65■□□□□ 0.74
TPRP12270 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPRP12270 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TPRP12270 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TPRP12270 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TPRP12270 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TPRP12270 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TPRP12270 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TPRP12270 KRT18P16-201ENST00000510337 1294 ntBASIC19.64■□□□□ 0.74
TPRP12270 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.74
TPRP12270 AC008175.2-201ENST00000612840 297 ntBASIC19.64■□□□□ 0.74
TPRP12270 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TPRP12270 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.64■□□□□ 0.73
TPRP12270 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPRP12270 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TPRP12270 AL691432.3-201ENST00000621860 400 ntBASIC19.64■□□□□ 0.73
TPRP12270 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
TPRP12270 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms