Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.63■□□□□ 0.89
PCCBP05166 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCCBP05166 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCCBP05166 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCCBP05166 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCCBP05166 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCCBP05166 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCCBP05166 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCCBP05166 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCCBP05166 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCCBP05166 MIPEPP3-201ENST00000412105 444 ntBASIC20.62■□□□□ 0.89
PCCBP05166 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.62■□□□□ 0.89
PCCBP05166 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.62■□□□□ 0.89
PCCBP05166 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCCBP05166 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCCBP05166 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCCBP05166 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.61■□□□□ 0.89
PCCBP05166 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.61■□□□□ 0.89
PCCBP05166 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.61■□□□□ 0.89
PCCBP05166 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCCBP05166 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCCBP05166 AL512625.2-201ENST00000417533 625 ntBASIC20.61■□□□□ 0.89
PCCBP05166 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.61■□□□□ 0.89
PCCBP05166 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.61■□□□□ 0.89
PCCBP05166 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.61■□□□□ 0.89
PCCBP05166 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCCBP05166 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCCBP05166 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.61■□□□□ 0.89
PCCBP05166 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCCBP05166 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCCBP05166 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.6■□□□□ 0.89
PCCBP05166 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCCBP05166 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PCCBP05166 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCCBP05166 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.6■□□□□ 0.89
PCCBP05166 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCCBP05166 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCCBP05166 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
PCCBP05166 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.6■□□□□ 0.89
PCCBP05166 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCCBP05166 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCCBP05166 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCCBP05166 BX276092.2-201ENST00000417668 665 ntBASIC20.6■□□□□ 0.89
PCCBP05166 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.6■□□□□ 0.89
PCCBP05166 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.6■□□□□ 0.89
PCCBP05166 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCCBP05166 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.6■□□□□ 0.89
PCCBP05166 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCCBP05166 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.6■□□□□ 0.89
PCCBP05166 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCCBP05166 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCCBP05166 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCCBP05166 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PCCBP05166 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCCBP05166 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCCBP05166 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PCCBP05166 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCCBP05166 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
PCCBP05166 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCCBP05166 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCCBP05166 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
PCCBP05166 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCCBP05166 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCCBP05166 AC244015.2-201ENST00000616358 1861 ntBASIC20.59■□□□□ 0.89
PCCBP05166 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCCBP05166 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.59■□□□□ 0.89
PCCBP05166 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCCBP05166 AC069152.1-201ENST00000438030 544 ntBASIC20.59■□□□□ 0.89
PCCBP05166 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.59■□□□□ 0.89
PCCBP05166 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
PCCBP05166 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.59■□□□□ 0.89
PCCBP05166 AC010980.2-201ENST00000587099 1412 ntBASIC20.59■□□□□ 0.89
PCCBP05166 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCCBP05166 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.59■□□□□ 0.89
PCCBP05166 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.59■□□□□ 0.89
PCCBP05166 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCCBP05166 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.58■□□□□ 0.89
PCCBP05166 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCCBP05166 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCCBP05166 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PCCBP05166 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCCBP05166 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCCBP05166 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.58■□□□□ 0.89
PCCBP05166 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.58■□□□□ 0.89
PCCBP05166 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.58■□□□□ 0.89
PCCBP05166 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.58■□□□□ 0.89
PCCBP05166 FAM21FP-204ENST00000608637 956 ntBASIC20.58■□□□□ 0.89
PCCBP05166 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PCCBP05166 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCCBP05166 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCCBP05166 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PCCBP05166 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PCCBP05166 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.58■□□□□ 0.88
PCCBP05166 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.58■□□□□ 0.88
PCCBP05166 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.58■□□□□ 0.88
PCCBP05166 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.57■□□□□ 0.88
PCCBP05166 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.57■□□□□ 0.88
PCCBP05166 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCCBP05166 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PCCBP05166 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms