Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.4■□□□□ 0.7
OPN1SWP03999 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.4■□□□□ 0.7
OPN1SWP03999 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
OPN1SWP03999 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.4■□□□□ 0.7
OPN1SWP03999 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPN1SWP03999 GABARAPL3-202ENST00000624044 1851 ntBASIC19.39■□□□□ 0.7
OPN1SWP03999 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
OPN1SWP03999 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
OPN1SWP03999 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
OPN1SWP03999 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPN1SWP03999 PBX2P1-201ENST00000493219 1291 ntBASIC19.39■□□□□ 0.69
OPN1SWP03999 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.39■□□□□ 0.69
OPN1SWP03999 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
OPN1SWP03999 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.39■□□□□ 0.69
OPN1SWP03999 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.39■□□□□ 0.69
OPN1SWP03999 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPN1SWP03999 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPN1SWP03999 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.39■□□□□ 0.69
OPN1SWP03999 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
OPN1SWP03999 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPN1SWP03999 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPN1SWP03999 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
OPN1SWP03999 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
OPN1SWP03999 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPN1SWP03999 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPN1SWP03999 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
OPN1SWP03999 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
OPN1SWP03999 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.39■□□□□ 0.69
OPN1SWP03999 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
OPN1SWP03999 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
OPN1SWP03999 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPN1SWP03999 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPN1SWP03999 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPN1SWP03999 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPN1SWP03999 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPN1SWP03999 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
OPN1SWP03999 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPN1SWP03999 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.38■□□□□ 0.69
OPN1SWP03999 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPN1SWP03999 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.38■□□□□ 0.69
OPN1SWP03999 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.38■□□□□ 0.69
OPN1SWP03999 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.38■□□□□ 0.69
OPN1SWP03999 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.38■□□□□ 0.69
OPN1SWP03999 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.38■□□□□ 0.69
OPN1SWP03999 AC027682.1-201ENST00000562846 899 ntBASIC19.38■□□□□ 0.69
OPN1SWP03999 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.38■□□□□ 0.69
OPN1SWP03999 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
OPN1SWP03999 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPN1SWP03999 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.37■□□□□ 0.69
OPN1SWP03999 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
OPN1SWP03999 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPN1SWP03999 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPN1SWP03999 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
OPN1SWP03999 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
OPN1SWP03999 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
OPN1SWP03999 AC027702.1-201ENST00000563810 1770 ntBASIC19.37■□□□□ 0.69
OPN1SWP03999 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.37■□□□□ 0.69
OPN1SWP03999 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
OPN1SWP03999 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
OPN1SWP03999 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.37■□□□□ 0.69
OPN1SWP03999 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPN1SWP03999 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.37■□□□□ 0.69
OPN1SWP03999 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.37■□□□□ 0.69
OPN1SWP03999 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPN1SWP03999 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
OPN1SWP03999 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.37■□□□□ 0.69
OPN1SWP03999 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
OPN1SWP03999 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
OPN1SWP03999 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPN1SWP03999 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPN1SWP03999 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
OPN1SWP03999 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.36■□□□□ 0.69
OPN1SWP03999 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPN1SWP03999 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
OPN1SWP03999 BX005040.4-201ENST00000637145 1518 ntBASIC19.36■□□□□ 0.69
OPN1SWP03999 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPN1SWP03999 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
OPN1SWP03999 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
OPN1SWP03999 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
OPN1SWP03999 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPN1SWP03999 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
OPN1SWP03999 AC008406.3-201ENST00000620001 1374 ntBASIC19.36■□□□□ 0.69
OPN1SWP03999 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPN1SWP03999 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPN1SWP03999 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPN1SWP03999 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
OPN1SWP03999 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.36■□□□□ 0.69
OPN1SWP03999 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.36■□□□□ 0.69
OPN1SWP03999 AP001330.3-201ENST00000520123 633 ntBASIC19.36■□□□□ 0.69
OPN1SWP03999 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
OPN1SWP03999 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.36■□□□□ 0.69
OPN1SWP03999 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
OPN1SWP03999 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPN1SWP03999 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.36■□□□□ 0.69
OPN1SWP03999 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
OPN1SWP03999 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.36■□□□□ 0.69
OPN1SWP03999 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPN1SWP03999 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
OPN1SWP03999 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.35■□□□□ 0.69
OPN1SWP03999 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms