Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 AP000974.1-201ENST00000623909 2387 ntBASIC13.56□□□□□ -0.24
TRACP01848 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
TRACP01848 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
TRACP01848 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.55□□□□□ -0.24
TRACP01848 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRACP01848 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRACP01848 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRACP01848 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRACP01848 AC116562.4-201ENST00000641316 2276 ntBASIC13.55□□□□□ -0.24
TRACP01848 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRACP01848 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRACP01848 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRACP01848 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRACP01848 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
TRACP01848 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC13.55□□□□□ -0.24
TRACP01848 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRACP01848 NFIC-211ENST00000641145 8399 ntBASIC13.55□□□□□ -0.24
TRACP01848 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRACP01848 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRACP01848 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRACP01848 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRACP01848 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRACP01848 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRACP01848 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRACP01848 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRACP01848 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRACP01848 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.54□□□□□ -0.24
TRACP01848 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRACP01848 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRACP01848 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRACP01848 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRACP01848 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.54□□□□□ -0.24
TRACP01848 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRACP01848 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRACP01848 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC13.54□□□□□ -0.24
TRACP01848 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC13.54□□□□□ -0.24
TRACP01848 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRACP01848 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
TRACP01848 AC020907.5-201ENST00000624372 1936 ntBASIC13.54□□□□□ -0.24
TRACP01848 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRACP01848 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRACP01848 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TRACP01848 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRACP01848 AC004408.2-201ENST00000623613 2777 ntBASIC13.54□□□□□ -0.24
TRACP01848 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRACP01848 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRACP01848 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.53□□□□□ -0.24
TRACP01848 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.53□□□□□ -0.24
TRACP01848 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRACP01848 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRACP01848 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.53□□□□□ -0.24
TRACP01848 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRACP01848 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRACP01848 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRACP01848 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRACP01848 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRACP01848 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC13.53□□□□□ -0.24
TRACP01848 AC009086.3-201ENST00000623486 1008 ntBASIC13.53□□□□□ -0.24
TRACP01848 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRACP01848 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRACP01848 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRACP01848 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRACP01848 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.53□□□□□ -0.24
TRACP01848 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRACP01848 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.53□□□□□ -0.24
TRACP01848 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRACP01848 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRACP01848 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.53□□□□□ -0.24
TRACP01848 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.53□□□□□ -0.24
TRACP01848 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRACP01848 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRACP01848 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRACP01848 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
TRACP01848 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
TRACP01848 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
TRACP01848 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.52□□□□□ -0.24
TRACP01848 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRACP01848 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRACP01848 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.52□□□□□ -0.24
TRACP01848 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRACP01848 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.52□□□□□ -0.24
TRACP01848 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRACP01848 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRACP01848 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRACP01848 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRACP01848 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRACP01848 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRACP01848 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.52□□□□□ -0.25
TRACP01848 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRACP01848 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC13.52□□□□□ -0.25
TRACP01848 LINC01529-204ENST00000636474 1715 ntBASIC13.52□□□□□ -0.25
TRACP01848 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC13.52□□□□□ -0.25
TRACP01848 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRACP01848 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRACP01848 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
TRACP01848 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRACP01848 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
TRACP01848 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRACP01848 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRACP01848 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms