Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.55■□□□□ 0.4
PDCD6O75340 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDCD6O75340 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDCD6O75340 EDA-201ENST00000338901 1233 ntBASIC17.55■□□□□ 0.4
PDCD6O75340 AP001330.3-201ENST00000520123 633 ntBASIC17.55■□□□□ 0.4
PDCD6O75340 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.55■□□□□ 0.4
PDCD6O75340 AC106739.1-201ENST00000617035 715 ntBASIC17.55■□□□□ 0.4
PDCD6O75340 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDCD6O75340 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDCD6O75340 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDCD6O75340 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDCD6O75340 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDCD6O75340 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDCD6O75340 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PDCD6O75340 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PDCD6O75340 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDCD6O75340 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.54■□□□□ 0.4
PDCD6O75340 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.54■□□□□ 0.4
PDCD6O75340 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDCD6O75340 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDCD6O75340 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.54■□□□□ 0.4
PDCD6O75340 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.54■□□□□ 0.4
PDCD6O75340 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
PDCD6O75340 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDCD6O75340 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.53■□□□□ 0.4
PDCD6O75340 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PDCD6O75340 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.53■□□□□ 0.4
PDCD6O75340 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.53■□□□□ 0.4
PDCD6O75340 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.53■□□□□ 0.4
PDCD6O75340 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDCD6O75340 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
PDCD6O75340 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.53■□□□□ 0.4
PDCD6O75340 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.53■□□□□ 0.4
PDCD6O75340 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PDCD6O75340 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDCD6O75340 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.53■□□□□ 0.4
PDCD6O75340 RASA4CP-201ENST00000424092 1398 ntBASIC17.53■□□□□ 0.4
PDCD6O75340 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDCD6O75340 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDCD6O75340 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
PDCD6O75340 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PDCD6O75340 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.52■□□□□ 0.4
PDCD6O75340 AC007225.1-201ENST00000566331 1836 ntBASIC17.52■□□□□ 0.4
PDCD6O75340 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDCD6O75340 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDCD6O75340 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PDCD6O75340 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.52■□□□□ 0.4
PDCD6O75340 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.52■□□□□ 0.4
PDCD6O75340 EEF1DP3-203ENST00000566025 782 ntBASIC17.52■□□□□ 0.4
PDCD6O75340 AC053503.5-201ENST00000601508 636 ntBASIC17.52■□□□□ 0.4
PDCD6O75340 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDCD6O75340 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDCD6O75340 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDCD6O75340 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDCD6O75340 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDCD6O75340 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDCD6O75340 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.52■□□□□ 0.39
PDCD6O75340 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDCD6O75340 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PDCD6O75340 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDCD6O75340 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.51■□□□□ 0.39
PDCD6O75340 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.51■□□□□ 0.39
PDCD6O75340 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDCD6O75340 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PDCD6O75340 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PDCD6O75340 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDCD6O75340 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDCD6O75340 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PDCD6O75340 AL355001.2-201ENST00000620617 1191 ntBASIC17.51■□□□□ 0.39
PDCD6O75340 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDCD6O75340 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDCD6O75340 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDCD6O75340 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PDCD6O75340 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDCD6O75340 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDCD6O75340 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDCD6O75340 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDCD6O75340 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDCD6O75340 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.5■□□□□ 0.39
PDCD6O75340 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PDCD6O75340 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDCD6O75340 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDCD6O75340 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PDCD6O75340 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
PDCD6O75340 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PDCD6O75340 MIR939-201ENST00000401314 82 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms