Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.9■□□□□ 0.94
FOXD2O60548 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXD2O60548 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXD2O60548 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXD2O60548 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
FOXD2O60548 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD2O60548 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
FOXD2O60548 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD2O60548 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD2O60548 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
FOXD2O60548 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD2O60548 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXD2O60548 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD2O60548 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD2O60548 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXD2O60548 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXD2O60548 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXD2O60548 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.89■□□□□ 0.93
FOXD2O60548 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXD2O60548 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
FOXD2O60548 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.88■□□□□ 0.93
FOXD2O60548 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
FOXD2O60548 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXD2O60548 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXD2O60548 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD2O60548 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD2O60548 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD2O60548 KRT17P3-201ENST00000420566 1262 ntBASIC20.88■□□□□ 0.93
FOXD2O60548 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD2O60548 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.88■□□□□ 0.93
FOXD2O60548 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
FOXD2O60548 RPPH1-201ENST00000516869 333 ntBASIC20.88■□□□□ 0.93
FOXD2O60548 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXD2O60548 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXD2O60548 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
FOXD2O60548 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.88■□□□□ 0.93
FOXD2O60548 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD2O60548 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD2O60548 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD2O60548 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD2O60548 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXD2O60548 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.87■□□□□ 0.93
FOXD2O60548 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXD2O60548 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.87■□□□□ 0.93
FOXD2O60548 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 AC060766.5-201ENST00000590539 871 ntBASIC20.87■□□□□ 0.93
FOXD2O60548 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
FOXD2O60548 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.87■□□□□ 0.93
FOXD2O60548 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.87■□□□□ 0.93
FOXD2O60548 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
FOXD2O60548 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FOXD2O60548 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXD2O60548 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
FOXD2O60548 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 RNF165-205ENST00000588679 2904 ntBASIC20.86■□□□□ 0.93
FOXD2O60548 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXD2O60548 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
FOXD2O60548 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXD2O60548 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FOXD2O60548 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXD2O60548 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXD2O60548 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.86■□□□□ 0.93
FOXD2O60548 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXD2O60548 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.86■□□□□ 0.93
FOXD2O60548 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXD2O60548 HLA-B-256ENST00000639848 1089 ntBASIC20.86■□□□□ 0.93
FOXD2O60548 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXD2O60548 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.86■□□□□ 0.93
FOXD2O60548 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXD2O60548 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 AP004607.7-201ENST00000527152 1677 ntBASIC20.86■□□□□ 0.93
FOXD2O60548 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXD2O60548 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXD2O60548 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FOXD2O60548 GUSBP5-202ENST00000510805 1989 ntBASIC20.85■□□□□ 0.93
FOXD2O60548 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms