Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL13O43927 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL13O43927 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CXCL13O43927 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.65■□□□□ 0.58
CXCL13O43927 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCL13O43927 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.65■□□□□ 0.58
CXCL13O43927 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCL13O43927 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.65■□□□□ 0.58
CXCL13O43927 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CXCL13O43927 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CXCL13O43927 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CXCL13O43927 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CXCL13O43927 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.65■□□□□ 0.58
CXCL13O43927 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CXCL13O43927 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CXCL13O43927 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CXCL13O43927 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CXCL13O43927 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL13O43927 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL13O43927 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL13O43927 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CXCL13O43927 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL13O43927 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.64■□□□□ 0.57
CXCL13O43927 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.64■□□□□ 0.57
CXCL13O43927 AC007322.4-201ENST00000509611 723 ntBASIC18.64■□□□□ 0.57
CXCL13O43927 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.64■□□□□ 0.57
CXCL13O43927 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.64■□□□□ 0.57
CXCL13O43927 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CXCL13O43927 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL13O43927 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL13O43927 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.64■□□□□ 0.57
CXCL13O43927 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL13O43927 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CXCL13O43927 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL13O43927 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL13O43927 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CXCL13O43927 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CXCL13O43927 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCL13O43927 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCL13O43927 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXCL13O43927 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.63■□□□□ 0.57
CXCL13O43927 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXCL13O43927 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.63■□□□□ 0.57
CXCL13O43927 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.63■□□□□ 0.57
CXCL13O43927 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCL13O43927 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.63■□□□□ 0.57
CXCL13O43927 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.63■□□□□ 0.57
CXCL13O43927 AC068338.2-201ENST00000563278 1430 ntBASIC18.63■□□□□ 0.57
CXCL13O43927 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CXCL13O43927 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCL13O43927 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.63■□□□□ 0.57
CXCL13O43927 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CXCL13O43927 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.63■□□□□ 0.57
CXCL13O43927 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.63■□□□□ 0.57
CXCL13O43927 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL13O43927 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL13O43927 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.62■□□□□ 0.57
CXCL13O43927 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL13O43927 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL13O43927 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL13O43927 AC091799.1-201ENST00000422823 811 ntBASIC18.62■□□□□ 0.57
CXCL13O43927 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.62■□□□□ 0.57
CXCL13O43927 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.62■□□□□ 0.57
CXCL13O43927 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.62■□□□□ 0.57
CXCL13O43927 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
CXCL13O43927 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL13O43927 AL050303.2-201ENST00000619798 666 ntBASIC18.62■□□□□ 0.57
CXCL13O43927 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL13O43927 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL13O43927 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL13O43927 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CXCL13O43927 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CXCL13O43927 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL13O43927 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CXCL13O43927 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL13O43927 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CXCL13O43927 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL13O43927 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.61■□□□□ 0.57
CXCL13O43927 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.61■□□□□ 0.57
CXCL13O43927 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CXCL13O43927 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.61■□□□□ 0.57
CXCL13O43927 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.61■□□□□ 0.57
CXCL13O43927 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CXCL13O43927 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL13O43927 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.61■□□□□ 0.57
CXCL13O43927 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL13O43927 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.61■□□□□ 0.57
CXCL13O43927 AL591742.1-201ENST00000604433 565 ntBASIC18.61■□□□□ 0.57
CXCL13O43927 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.61■□□□□ 0.57
CXCL13O43927 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL13O43927 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL13O43927 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL13O43927 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL13O43927 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL13O43927 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CXCL13O43927 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL13O43927 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL13O43927 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL13O43927 CYP2T1P-201ENST00000432607 1285 ntBASIC18.6■□□□□ 0.57
CXCL13O43927 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms