Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF11BO00300 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF11BO00300 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.2■□□□□ 0.66
TNFRSF11BO00300 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF11BO00300 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF11BO00300 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF11BO00300 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF11BO00300 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF11BO00300 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.2■□□□□ 0.66
TNFRSF11BO00300 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TNFRSF11BO00300 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFRSF11BO00300 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 AFG3L1P-217ENST00000557444 2447 ntBASIC19.18■□□□□ 0.66
TNFRSF11BO00300 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 AC007952.6-201ENST00000573168 2673 ntBASIC19.18■□□□□ 0.66
TNFRSF11BO00300 AC003957.1-201ENST00000625108 2673 ntBASIC19.18■□□□□ 0.66
TNFRSF11BO00300 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFRSF11BO00300 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFRSF11BO00300 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFRSF11BO00300 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.15■□□□□ 0.66
TNFRSF11BO00300 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms