Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AC020907.5-201ENST00000624372 1936 ntBASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 DUX4L4-201ENST00000566884 1269 ntBASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AC026471.6-201ENST00000622954 1905 ntBASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AC004687.1-201ENST00000579003 1625 ntBASIC13.17□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 MIR3648-2-201ENST00000581792 180 ntBASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 MIR3648-1-201ENST00000615959 180 ntBASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AC022413.1-201ENST00000624602 984 ntBASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms