Protein–RNA interactions for Protein: J3QR89

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 54 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
J3QR89 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
J3QR89 AC079598.2-202ENST00000546624 1451 ntBASIC14.18□□□□□ -0.14
J3QR89 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
J3QR89 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
J3QR89 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
J3QR89 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
J3QR89 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
J3QR89 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
J3QR89 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
J3QR89 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
J3QR89 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
J3QR89 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC14.17□□□□□ -0.14
J3QR89 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
J3QR89 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
J3QR89 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
J3QR89 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
J3QR89 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
J3QR89 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
J3QR89 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
J3QR89 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC14.17□□□□□ -0.14
J3QR89 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.16□□□□□ -0.14
J3QR89 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
J3QR89 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
J3QR89 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
J3QR89 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC14.16□□□□□ -0.14
J3QR89 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.16□□□□□ -0.14
J3QR89 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.16□□□□□ -0.14
J3QR89 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.16□□□□□ -0.14
J3QR89 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
J3QR89 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
J3QR89 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.16□□□□□ -0.14
J3QR89 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.16□□□□□ -0.14
J3QR89 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
J3QR89 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
J3QR89 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
J3QR89 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
J3QR89 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
J3QR89 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.16□□□□□ -0.14
J3QR89 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC14.15□□□□□ -0.14
J3QR89 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.15□□□□□ -0.14
J3QR89 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.15□□□□□ -0.14
J3QR89 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.15□□□□□ -0.14
J3QR89 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
J3QR89 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.15□□□□□ -0.14
J3QR89 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.15□□□□□ -0.14
J3QR89 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
J3QR89 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
J3QR89 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.15□□□□□ -0.15
J3QR89 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
J3QR89 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
J3QR89 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
J3QR89 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
J3QR89 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.14□□□□□ -0.15
J3QR89 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.14□□□□□ -0.15
J3QR89 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
J3QR89 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
J3QR89 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
J3QR89 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
J3QR89 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
J3QR89 Z98882.1-201ENST00000622160 2253 ntBASIC14.14□□□□□ -0.15
J3QR89 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
J3QR89 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC14.14□□□□□ -0.15
J3QR89 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
J3QR89 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
J3QR89 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC14.14□□□□□ -0.15
J3QR89 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
J3QR89 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
J3QR89 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
J3QR89 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
J3QR89 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
J3QR89 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.14□□□□□ -0.15
J3QR89 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms