Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL512408.1-201ENST00000569378 2000 ntBASIC21.61■■□□□ 1.05
CCDC188H7C350 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC188H7C350 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC188H7C350 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC188H7C350 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC188H7C350 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC188H7C350 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC188H7C350 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC188H7C350 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC188H7C350 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC188H7C350 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CCDC188H7C350 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC188H7C350 FP700111.2-201ENST00000619190 1892 ntBASIC21.6■■□□□ 1.05
CCDC188H7C350 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC188H7C350 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.6■■□□□ 1.05
CCDC188H7C350 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCDC188H7C350 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC188H7C350 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CCDC188H7C350 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC188H7C350 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC188H7C350 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC188H7C350 AC133561.4-201ENST00000566112 224 ntBASIC21.6■■□□□ 1.05
CCDC188H7C350 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.6■■□□□ 1.05
CCDC188H7C350 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CCDC188H7C350 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC188H7C350 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CCDC188H7C350 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC188H7C350 PCDHAC2-203ENST00000615316 3011 ntBASIC21.6■■□□□ 1.05
CCDC188H7C350 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC188H7C350 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC188H7C350 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC188H7C350 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC188H7C350 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC188H7C350 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC188H7C350 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC188H7C350 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC188H7C350 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC188H7C350 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC188H7C350 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC188H7C350 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC188H7C350 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC188H7C350 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC188H7C350 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCDC188H7C350 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC188H7C350 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC188H7C350 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC188H7C350 BX005040.4-201ENST00000637145 1518 ntBASIC21.59■■□□□ 1.05
CCDC188H7C350 AC055733.4-201ENST00000638462 1354 ntBASIC21.59■■□□□ 1.05
CCDC188H7C350 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC188H7C350 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC188H7C350 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC188H7C350 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC188H7C350 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC188H7C350 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC188H7C350 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
CCDC188H7C350 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.58■■□□□ 1.05
CCDC188H7C350 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CCDC188H7C350 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC188H7C350 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC188H7C350 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC188H7C350 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
CCDC188H7C350 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC188H7C350 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCDC188H7C350 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC188H7C350 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC188H7C350 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC188H7C350 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC188H7C350 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC188H7C350 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC188H7C350 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC188H7C350 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC188H7C350 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC188H7C350 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC188H7C350 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC188H7C350 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC188H7C350 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CCDC188H7C350 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CCDC188H7C350 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CCDC188H7C350 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC188H7C350 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC188H7C350 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CCDC188H7C350 AL035685.1-201ENST00000636663 812 ntBASIC21.56■■□□□ 1.04
CCDC188H7C350 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC188H7C350 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
CCDC188H7C350 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC188H7C350 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC188H7C350 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC188H7C350 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC188H7C350 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC188H7C350 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC188H7C350 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.55■■□□□ 1.04
CCDC188H7C350 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms