Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.41■■□□□ 1.66
TRIM6-TRIM34B2RNG4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 AC120498.10-201ENST00000621827 505 ntBASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM6-TRIM34B2RNG4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM6-TRIM34B2RNG4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
TRIM6-TRIM34B2RNG4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM6-TRIM34B2RNG4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM6-TRIM34B2RNG4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.39■■□□□ 1.66
TRIM6-TRIM34B2RNG4 RARRES2P6-201ENST00000567333 442 ntBASIC25.39■■□□□ 1.66
TRIM6-TRIM34B2RNG4 NTF6G-201ENST00000591094 616 ntBASIC25.39■■□□□ 1.66
TRIM6-TRIM34B2RNG4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
TRIM6-TRIM34B2RNG4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.39■■□□□ 1.65
TRIM6-TRIM34B2RNG4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRIM6-TRIM34B2RNG4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
TRIM6-TRIM34B2RNG4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM6-TRIM34B2RNG4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM6-TRIM34B2RNG4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM6-TRIM34B2RNG4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.38■■□□□ 1.65
TRIM6-TRIM34B2RNG4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
TRIM6-TRIM34B2RNG4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM6-TRIM34B2RNG4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.38■■□□□ 1.65
TRIM6-TRIM34B2RNG4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM6-TRIM34B2RNG4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC25.38■■□□□ 1.65
TRIM6-TRIM34B2RNG4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
TRIM6-TRIM34B2RNG4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 AC026271.2-201ENST00000428091 497 ntBASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM6-TRIM34B2RNG4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 KRT19P1-201ENST00000405746 1186 ntBASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 PLK5-205ENST00000642079 1969 ntBASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 KRT16P2-201ENST00000414673 1423 ntBASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM6-TRIM34B2RNG4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM6-TRIM34B2RNG4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
TRIM6-TRIM34B2RNG4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM6-TRIM34B2RNG4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM6-TRIM34B2RNG4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM6-TRIM34B2RNG4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM6-TRIM34B2RNG4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM6-TRIM34B2RNG4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.35■■□□□ 1.65
TRIM6-TRIM34B2RNG4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM6-TRIM34B2RNG4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM6-TRIM34B2RNG4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM6-TRIM34B2RNG4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM6-TRIM34B2RNG4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM6-TRIM34B2RNG4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 AC121338.2-201ENST00000622535 1744 ntBASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM6-TRIM34B2RNG4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms