Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3PXD2BA1X283 AFG3L1P-217ENST00000557444 2447 ntBASIC19.39■□□□□ 0.69
SH3PXD2BA1X283 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 SERBP1P1-201ENST00000396021 1160 ntBASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 AP005435.1-201ENST00000529293 1178 ntBASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 AC019069.1-201ENST00000610008 1333 ntBASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
SH3PXD2BA1X283 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 PBX2P1-201ENST00000493219 1291 ntBASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3PXD2BA1X283 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 SYT6-210ENST00000641643 1587 ntBASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3PXD2BA1X283 AC018445.3-201ENST00000624177 1945 ntBASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 UNC93B3-201ENST00000308076 687 ntBASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 AC136469.2-201ENST00000623944 1028 ntBASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3PXD2BA1X283 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 MIR638-201ENST00000385237 100 ntBASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 SLC47A1P1-202ENST00000449666 945 ntBASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 DUX4L19-201ENST00000557448 1267 ntBASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3PXD2BA1X283 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms