Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 CYP2T1P-201ENST00000432607 1285 ntBASIC15.03■□□□□ -0
IGHV4-28A0A0C4DH34 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.03■□□□□ -0
IGHV4-28A0A0C4DH34 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
IGHV4-28A0A0C4DH34 AC104771.1-201ENST00000603335 964 ntBASIC15.03■□□□□ -0
IGHV4-28A0A0C4DH34 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
IGHV4-28A0A0C4DH34 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.03■□□□□ -0
IGHV4-28A0A0C4DH34 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.03■□□□□ -0
IGHV4-28A0A0C4DH34 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.03■□□□□ -0
IGHV4-28A0A0C4DH34 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGHV4-28A0A0C4DH34 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGHV4-28A0A0C4DH34 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.03■□□□□ -0
IGHV4-28A0A0C4DH34 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 AC068338.2-201ENST00000563278 1430 ntBASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 AC083906.2-201ENST00000511578 360 ntBASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 AC243732.1-201ENST00000612648 864 ntBASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 AC008694.1-202ENST00000636953 945 ntBASIC15.02■□□□□ -0
IGHV4-28A0A0C4DH34 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGHV4-28A0A0C4DH34 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
IGHV4-28A0A0C4DH34 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
IGHV4-28A0A0C4DH34 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.02□□□□□ -0.01
IGHV4-28A0A0C4DH34 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGHV4-28A0A0C4DH34 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.02□□□□□ -0.01
IGHV4-28A0A0C4DH34 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 AL355802.2-201ENST00000402069 882 ntBASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGHV4-28A0A0C4DH34 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 SLC29A4P1-201ENST00000398760 971 ntBASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 AF201337.1-201ENST00000520239 748 ntBASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 AC105036.2-201ENST00000569468 176 ntBASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 AC069236.1-201ENST00000604339 616 ntBASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 AL591742.1-201ENST00000604433 565 ntBASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15□□□□□ -0.01
IGHV4-28A0A0C4DH34 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 FBXW4P1-201ENST00000426721 2239 ntBASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 AC133552.2-202ENST00000575694 574 ntBASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGHV4-28A0A0C4DH34 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms