Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 AC053503.5-201ENST00000601508 636 ntBASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV4A0A0B4J268 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 EEF1DP3-203ENST00000566025 782 ntBASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV4A0A0B4J268 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 MIR638-201ENST00000385237 100 ntBASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 AC079140.4-201ENST00000507448 529 ntBASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 MIR6084-201ENST00000622012 110 ntBASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV4A0A0B4J268 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 AC027612.3-201ENST00000413684 1047 ntBASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV4A0A0B4J268 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms