Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AC016026.1-201ENST00000476405 4328 ntTSL 2 BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 HAO2-205ENST00000622548 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 ARHGEF15-202ENST00000421050 4138 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 AC009169.1-201ENST00000563784 1377 ntBASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 DNHD1-202ENST00000354685 3205 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 ESR2-208ENST00000554572 3588 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 DNAJC5G-201ENST00000296097 2008 ntTSL 2 BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 COPS2-201ENST00000299259 2036 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 AC099792.1-202ENST00000635290 2012 ntTSL 5 BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 CYP11B1-201ENST00000292427 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 ARNTL-204ENST00000403482 2389 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 LINC00339-210ENST00000635675 1404 ntTSL 5 BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 SPIN3-218ENST00000639007 4277 ntAPPRIS P1 TSL 4 BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 EREG-201ENST00000244869 4619 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SYCE2Q6PIF2 OLAH-201ENST00000378217 1767 ntTSL 2 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AC005776.2-201ENST00000609708 1769 ntTSL 5 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 PHF21B-212ENST00000629843 3491 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 PKNOX1-203ENST00000432907 5180 ntTSL 2 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 BCAS3-201ENST00000390652 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 EHF-202ENST00000450654 2519 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 SERPINA5-208ENST00000554866 2211 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 LINC02069-201ENST00000457449 2591 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 DIS3L-202ENST00000319212 3647 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 IFIT5-201ENST00000371795 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 LINC01184-203ENST00000501652 1601 ntTSL 2 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 CLDN20-201ENST00000367165 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 APOM-201ENST00000375916 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 APOM-203ENST00000375920 709 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AC004920.1-201ENST00000422831 482 ntTSL 3 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AL513285.1-201ENST00000423187 432 ntTSL 3 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AL831784.1-201ENST00000427302 373 ntTSL 2 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 EMC3-202ENST00000429759 751 ntTSL 3 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AL354892.1-201ENST00000430250 335 ntTSL 3 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AC245060.3-201ENST00000432623 1242 ntBASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AC073135.1-201ENST00000451150 775 ntBASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AF003529.1-201ENST00000455649 644 ntBASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 UGT1A11P-201ENST00000456635 849 ntBASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AC104791.1-201ENST00000514334 794 ntTSL 3 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AP001330.1-201ENST00000524287 731 ntTSL 3 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AP001189.4-201ENST00000533588 452 ntTSL 3 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 C15orf40-209ENST00000538348 561 ntTSL 2 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 SRSF5-204ENST00000553548 526 ntTSL 4 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AL139300.2-201ENST00000556332 553 ntTSL 4 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AC130651.2-201ENST00000573856 536 ntTSL 5 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 Metazoa_SRP.169-201ENST00000613708 283 ntBASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 CTBP1-219ENST00000629223 210 ntTSL 5 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 LINC01002-213ENST00000632086 918 ntTSL 5 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 PTGER4P2-CDK2AP2P2-201ENST00000619442 3123 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 CES5A-202ENST00000319165 2016 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 PCDHGB6-202ENST00000616430 4601 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 ZWILCH-214ENST00000613446 3181 ntTSL 5 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 ZNF473-201ENST00000270617 4688 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 MSH5-SAPCD1-207ENST00000493662 3991 ntAPPRIS P5 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 AC015920.1-201ENST00000624645 2450 ntBASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 ANO5-201ENST00000324559 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 MC1R-203ENST00000555427 3637 ntTSL 5 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 EPB41L1-218ENST00000628415 3287 ntTSL 2 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 PLSCR4-210ENST00000493382 1375 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 TEX9-202ENST00000537232 1768 ntTSL 2 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 CFAP65-207ENST00000441968 3416 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 GJB6-201ENST00000241124 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 ARHGAP30-203ENST00000368016 3482 ntTSL 5 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 CFAP69-201ENST00000389297 3902 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 GNPDA1-201ENST00000311337 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 ASNS-205ENST00000422745 1865 ntTSL 5 BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 ZNF154-202ENST00000512439 5687 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 KCTD21-201ENST00000340067 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYCE2Q6PIF2 TMEM63A-201ENST00000366835 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 GPATCH2-201ENST00000366934 3218 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 PLEKHM3-204ENST00000457206 3689 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 KLHL6-201ENST00000341319 6298 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 MAPKBP1-202ENST00000457542 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 CASP7-202ENST00000369315 2421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 ZNF664-201ENST00000337815 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 SWT1-201ENST00000367500 3830 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 POP1-202ENST00000401707 4719 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 AC108704.2-201ENST00000623017 1565 ntBASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 GRIK3-202ENST00000373093 2955 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 TIGIT-201ENST00000383671 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 AL035681.1-201ENST00000441316 2500 ntTSL 2 BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 CLP1-201ENST00000302731 1634 ntTSL 2 BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 AC012456.1-201ENST00000430048 1605 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 CDH18-202ENST00000382275 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 ZFP36L1-204ENST00000555997 3094 ntTSL 3 BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 PPP2R2C-202ENST00000335585 4092 ntTSL 2 BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 ZFYVE1-203ENST00000553891 3244 ntTSL 5 BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 GRSF1-203ENST00000502323 1794 ntTSL 5 BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 MAP6-204ENST00000526740 1755 ntTSL 5 BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 DNAJB13-205ENST00000543947 1779 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 OR10H4-201ENST00000322107 951 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 SNORA55-201ENST00000364587 135 ntBASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 ST3GAL3-217ENST00000372369 1038 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SYCE2Q6PIF2 GHRH-203ENST00000373614 570 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms