RNA–Protein interactions for RNA: ENST00000616430.1

PCDHGB6-202, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB6, Length 4,601 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-202ENST00000616430 NISCHQ9Y2I1 1504 aa18.97■□□□□ 0.63
PCDHGB6-202ENST00000616430 DCAF8L2P0C7V8 631 aa18.71■□□□□ 0.59
PCDHGB6-202ENST00000616430 SUPT5HO00267 1087 aaKnown RBP18.31■□□□□ 0.52
PCDHGB6-202ENST00000616430 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
PCDHGB6-202ENST00000616430 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
PCDHGB6-202ENST00000616430 PCGF6Q9BYE7 350 aa17.36■□□□□ 0.37
PCDHGB6-202ENST00000616430 FAM9AQ8IZU1 332 aaPredicted RBP17.19■□□□□ 0.34
PCDHGB6-202ENST00000616430 TTBK1Q5TCY1 1321 aaPredicted RBP16.93■□□□□ 0.3
PCDHGB6-202ENST00000616430 ABCC9O60706 1549 aa16.92■□□□□ 0.3
PCDHGB6-202ENST00000616430 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
PCDHGB6-202ENST00000616430 APLP2Q06481 763 aa16.81■□□□□ 0.28
PCDHGB6-202ENST00000616430 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
PCDHGB6-202ENST00000616430 HRCP23327 699 aa16.75■□□□□ 0.27
PCDHGB6-202ENST00000616430 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
PCDHGB6-202ENST00000616430 CCER1Q8TC90 406 aaPredicted RBP16.71■□□□□ 0.27
PCDHGB6-202ENST00000616430 LOC105371045A0A1W2PR82 267 aa16.66■□□□□ 0.26
PCDHGB6-202ENST00000616430 PELP1Q8IZL8 1130 aaKnown RBP16.65■□□□□ 0.26
PCDHGB6-202ENST00000616430 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
PCDHGB6-202ENST00000616430 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
PCDHGB6-202ENST00000616430 CENPBP07199 599 aaPredicted RBP16.59■□□□□ 0.25
PCDHGB6-202ENST00000616430 RANGAP1P46060 587 aaPredicted RBP16.59■□□□□ 0.25
PCDHGB6-202ENST00000616430 UBTFP17480 764 aaKnown RBP16.51■□□□□ 0.23
PCDHGB6-202ENST00000616430 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
PCDHGB6-202ENST00000616430 YTHDC1Q96MU7 727 aaKnown RBP16.37■□□□□ 0.21
PCDHGB6-202ENST00000616430 ATP1B4Q9UN42 357 aaPredicted RBP16.23■□□□□ 0.19
PCDHGB6-202ENST00000616430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.15■□□□□ 0.18
PCDHGB6-202ENST00000616430 HNRNPUL2Q1KMD3 747 aaKnown RBP16.1■□□□□ 0.17
PCDHGB6-202ENST00000616430 ITGAEP38570 1179 aa16■□□□□ 0.15
PCDHGB6-202ENST00000616430 DIEXFQ68CQ4 756 aaKnown RBP16■□□□□ 0.15
PCDHGB6-202ENST00000616430 NEFLP07196 543 aa15.99■□□□□ 0.15
PCDHGB6-202ENST00000616430 ERICH6Q7L0X2 663 aa15.99■□□□□ 0.15
PCDHGB6-202ENST00000616430 MYT1Q01538 1121 aa15.93■□□□□ 0.14
PCDHGB6-202ENST00000616430 ZCCHC6Q5VYS8 1495 aaKnown RBP15.81■□□□□ 0.12
PCDHGB6-202ENST00000616430 GTF3C3Q9Y5Q9 886 aa15.78■□□□□ 0.12
PCDHGB6-202ENST00000616430 CCDC180Q9P1Z9 1646 aa15.75■□□□□ 0.11
PCDHGB6-202ENST00000616430 DCAF1Q9Y4B6 1507 aa15.72■□□□□ 0.11
PCDHGB6-202ENST00000616430 MYO15BQ96JP2 1530 aa15.69■□□□□ 0.1
PCDHGB6-202ENST00000616430 ZNF316A6NFI3 1004 aaPredicted RBP15.65■□□□□ 0.1
PCDHGB6-202ENST00000616430 ACIN1Q9UKV3 1341 aaKnown RBP15.64■□□□□ 0.09
PCDHGB6-202ENST00000616430 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
PCDHGB6-202ENST00000616430 POLR3GLQ9BT43 218 aa15.61■□□□□ 0.09
PCDHGB6-202ENST00000616430 CSRNP3Q8WYN3 585 aa15.6■□□□□ 0.09
PCDHGB6-202ENST00000616430 CNGB1Q14028 1251 aaPredicted RBP15.58■□□□□ 0.09
PCDHGB6-202ENST00000616430 FAM50AQ14320 339 aaKnown RBP15.58■□□□□ 0.08
PCDHGB6-202ENST00000616430 NEUROD1Q13562 356 aa15.54■□□□□ 0.08
PCDHGB6-202ENST00000616430 RB1CC1Q8TDY2 1594 aa15.51■□□□□ 0.07
PCDHGB6-202ENST00000616430 BCANQ96GW7 911 aa15.5■□□□□ 0.07
PCDHGB6-202ENST00000616430 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
PCDHGB6-202ENST00000616430 TRIM52Q96A61 297 aa15.37■□□□□ 0.05
PCDHGB6-202ENST00000616430 ANP32CO43423 234 aa15.35■□□□□ 0.05
PCDHGB6-202ENST00000616430 P3H3Q8IVL6 736 aa15.32■□□□□ 0.04
PCDHGB6-202ENST00000616430 RSF1Q96T23 1441 aaPredicted RBP15.31■□□□□ 0.04
PCDHGB6-202ENST00000616430 NACADO15069 1562 aa15.29■□□□□ 0.04
PCDHGB6-202ENST00000616430 FBLN2P98095 1184 aa15.28■□□□□ 0.04
PCDHGB6-202ENST00000616430 DAXXQ9UER7 740 aaPredicted RBP15.28■□□□□ 0.04
PCDHGB6-202ENST00000616430 MYT1LQ9UL68 1186 aa15.24■□□□□ 0.03
PCDHGB6-202ENST00000616430 MIER1Q8N108 512 aa15.23■□□□□ 0.03
PCDHGB6-202ENST00000616430 ZNF326Q5BKZ1 582 aaKnown RBP15.2■□□□□ 0.02
PCDHGB6-202ENST00000616430 CDK11AQ9UQ88 783 aaPredicted RBP15.18■□□□□ 0.02
PCDHGB6-202ENST00000616430 DDX10Q13206 875 aaKnown RBP15.16■□□□□ 0.02
PCDHGB6-202ENST00000616430 RTL5Q5HYW3 569 aaPredicted RBP15.15■□□□□ 0.02
PCDHGB6-202ENST00000616430 FKBP8Q14318 412 aa15.15■□□□□ 0.02
PCDHGB6-202ENST00000616430 ARID3CA6NKF2 412 aa15.13■□□□□ 0.01
PCDHGB6-202ENST00000616430 CEP162Q5TB80 1403 aa15.13■□□□□ 0.01
PCDHGB6-202ENST00000616430 CLIP1P30622 1438 aa15.11■□□□□ 0.01
PCDHGB6-202ENST00000616430 CLSPNQ9HAW4 1339 aa15.08■□□□□ 0.01
PCDHGB6-202ENST00000616430 SLC4A1APQ9BWU0 796 aaKnown RBP15.05■□□□□ 0
PCDHGB6-202ENST00000616430 TONSLQ96HA7 1378 aa15.05■□□□□ -0
PCDHGB6-202ENST00000616430 HNRNPUQ00839 825 aaKnown RBP eCLIP15.02■□□□□ -0
PCDHGB6-202ENST00000616430 HIRIP3Q9BW71 556 aaPredicted RBP15.01□□□□□ -0.01
PCDHGB6-202ENST00000616430 GOLGA3Q08378 1498 aa15□□□□□ -0.01
PCDHGB6-202ENST00000616430 EEA1Q15075 1411 aa15□□□□□ -0.01
PCDHGB6-202ENST00000616430 TNIKQ9UKE5 1360 aa15□□□□□ -0.01
PCDHGB6-202ENST00000616430 DNAJC5BQ9UF47 199 aa14.99□□□□□ -0.01
PCDHGB6-202ENST00000616430 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
PCDHGB6-202ENST00000616430 ZNF777Q9ULD5 760 aaPredicted RBP14.95□□□□□ -0.02
PCDHGB6-202ENST00000616430 WRNQ14191 1432 aaPredicted RBP eCLIP14.94□□□□□ -0.02
PCDHGB6-202ENST00000616430 FAM9BQ8IZU0 186 aa14.94□□□□□ -0.02
PCDHGB6-202ENST00000616430 CHIC2Q9UKJ5 165 aa14.93□□□□□ -0.02
PCDHGB6-202ENST00000616430 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
PCDHGB6-202ENST00000616430 SOGA1O94964 1423 aa14.87□□□□□ -0.03
PCDHGB6-202ENST00000616430 ANP32AP39687 249 aaKnown RBP14.86□□□□□ -0.03
PCDHGB6-202ENST00000616430 IRX6P78412 446 aaPredicted RBP14.86□□□□□ -0.03
PCDHGB6-202ENST00000616430 CEP164Q9UPV0 1460 aa14.85□□□□□ -0.03
PCDHGB6-202ENST00000616430 NPM2Q86SE8 214 aaKnown RBP14.85□□□□□ -0.03
PCDHGB6-202ENST00000616430 BAZ1BQ9UIG0 1483 aaKnown RBP14.84□□□□□ -0.03
PCDHGB6-202ENST00000616430 MTUS2Q5JR59 1369 aa14.83□□□□□ -0.04
PCDHGB6-202ENST00000616430 MRS2Q9HD23 443 aa14.81□□□□□ -0.04
PCDHGB6-202ENST00000616430 SALL2Q9Y467 1007 aaPredicted RBP14.8□□□□□ -0.04
PCDHGB6-202ENST00000616430 BAZ1AQ9NRL2 1556 aaPredicted RBP14.79□□□□□ -0.04
PCDHGB6-202ENST00000616430 MROH2BQ7Z745 1585 aa14.79□□□□□ -0.04
PCDHGB6-202ENST00000616430 RRP7BPQ9NSQ0 103 aa14.77□□□□□ -0.04
PCDHGB6-202ENST00000616430 SIN3AQ96ST3 1273 aa14.77□□□□□ -0.04
PCDHGB6-202ENST00000616430 CANXP27824 592 aaKnown RBP14.75□□□□□ -0.05
PCDHGB6-202ENST00000616430 CCDC136Q96JN2 1154 aa14.75□□□□□ -0.05
PCDHGB6-202ENST00000616430 TMC1Q8TDI8 760 aa14.75□□□□□ -0.05
PCDHGB6-202ENST00000616430 EIF4G2P78344 907 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCDHGB6-202ENST00000616430 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
PCDHGB6-202ENST00000616430 CCDC88BA6NC98 1476 aa14.73□□□□□ -0.05
PCDHGB6-202ENST00000616430 SUPT16HQ9Y5B9 1047 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms