RNA–Protein interactions for RNA: ENST00000367165.3

CLDN20-201, Transcript of claudin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN20, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20-201ENST00000367165 AEBP2Q6ZN18 517 aaPredicted RBP29.19■■■□□ 2.26
CLDN20-201ENST00000367165 CHIC1Q5VXU3 224 aa27.24■■□□□ 1.95
CLDN20-201ENST00000367165 SENP3Q9H4L4 574 aaPredicted RBP25.06■■□□□ 1.6
CLDN20-201ENST00000367165 PHF23Q9BUL5 403 aaPredicted RBP24.58■■□□□ 1.53
CLDN20-201ENST00000367165 POTEDQ86YR6 584 aa23.56■■□□□ 1.36
CLDN20-201ENST00000367165 FOXD1Q16676 465 aa23.47■■□□□ 1.35
CLDN20-201ENST00000367165 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
CLDN20-201ENST00000367165 MSH5O43196 834 aa22.37■■□□□ 1.17
CLDN20-201ENST00000367165 PIAS4Q8N2W9 510 aaPredicted RBP21.64■■□□□ 1.05
CLDN20-201ENST00000367165 PLPPR3Q6T4P5 718 aa21.4■■□□□ 1.02
CLDN20-201ENST00000367165 ABCC9O60706 1549 aa21.2■□□□□ 0.98
CLDN20-201ENST00000367165 PPP6R1Q9UPN7 881 aa21.16■□□□□ 0.98
CLDN20-201ENST00000367165 CCDC180Q9P1Z9 1646 aa21.1■□□□□ 0.97
CLDN20-201ENST00000367165 ADRA2BP18089 450 aa21■□□□□ 0.95
CLDN20-201ENST00000367165 RB1CC1Q8TDY2 1594 aa20.16■□□□□ 0.82
CLDN20-201ENST00000367165 NACADO15069 1562 aa19.99■□□□□ 0.79
CLDN20-201ENST00000367165 DNAJC5BQ9UF47 199 aa19.94■□□□□ 0.78
CLDN20-201ENST00000367165 CACNB1Q02641 598 aaPredicted RBP19.77■□□□□ 0.76
CLDN20-201ENST00000367165 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
CLDN20-201ENST00000367165 DMRT2Q9Y5R5 561 aa19.73■□□□□ 0.75
CLDN20-201ENST00000367165 MYO15BQ96JP2 1530 aa19.7■□□□□ 0.74
CLDN20-201ENST00000367165 PABPN1Q86U42 306 aaKnown RBP eCLIP19.68■□□□□ 0.74
CLDN20-201ENST00000367165 MAPK8IP2Q13387 824 aaPredicted RBP19.6■□□□□ 0.73
CLDN20-201ENST00000367165 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
CLDN20-201ENST00000367165 BICRAQ9NZM4 1560 aa19.54■□□□□ 0.72
CLDN20-201ENST00000367165 ZCCHC6Q5VYS8 1495 aaKnown RBP19.43■□□□□ 0.7
CLDN20-201ENST00000367165 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.69
CLDN20-201ENST00000367165 SHROOM4Q9ULL8 1493 aa19.37■□□□□ 0.69
CLDN20-201ENST00000367165 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
CLDN20-201ENST00000367165 SCRIBQ14160 1630 aa19.2■□□□□ 0.66
CLDN20-201ENST00000367165 CC2D2AQ9P2K1 1620 aa19.14■□□□□ 0.66
CLDN20-201ENST00000367165 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
CLDN20-201ENST00000367165 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
CLDN20-201ENST00000367165 RNF39Q9H2S5 420 aa19.01■□□□□ 0.63
CLDN20-201ENST00000367165 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
CLDN20-201ENST00000367165 PPP4R3CPQ6ZMV5 832 aa18.77■□□□□ 0.6
CLDN20-201ENST00000367165 C1QBPQ07021 282 aaKnown RBP18.67■□□□□ 0.58
CLDN20-201ENST00000367165 HOXD11P31277 338 aaPredicted RBP18.63■□□□□ 0.57
CLDN20-201ENST00000367165 DNAJC5Q9H3Z4 198 aa18.45■□□□□ 0.54
CLDN20-201ENST00000367165 NCAPD3P42695 1498 aa18.45■□□□□ 0.54
CLDN20-201ENST00000367165 CUX2O14529 1486 aa18.39■□□□□ 0.53
CLDN20-201ENST00000367165 CNKSR2Q8WXI2 1034 aa18.38■□□□□ 0.53
CLDN20-201ENST00000367165 ATAD2BQ9ULI0 1458 aa18.37■□□□□ 0.53
CLDN20-201ENST00000367165 ERCC6Q03468 1493 aa18.35■□□□□ 0.53
CLDN20-201ENST00000367165 SMARCA2P51531 1590 aa18.33■□□□□ 0.52
CLDN20-201ENST00000367165 HMGXB3Q12766 1538 aa18.33■□□□□ 0.52
CLDN20-201ENST00000367165 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
CLDN20-201ENST00000367165 POTEHQ6S545 545 aa18.25■□□□□ 0.51
CLDN20-201ENST00000367165 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
CLDN20-201ENST00000367165 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
CLDN20-201ENST00000367165 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
CLDN20-201ENST00000367165 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
CLDN20-201ENST00000367165 NESP48681 1621 aa18.16■□□□□ 0.5
CLDN20-201ENST00000367165 PEG3Q9GZU2 1588 aa18.16■□□□□ 0.5
CLDN20-201ENST00000367165 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
CLDN20-201ENST00000367165 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
CLDN20-201ENST00000367165 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
CLDN20-201ENST00000367165 PDS5BQ9NTI5 1447 aa17.97■□□□□ 0.47
CLDN20-201ENST00000367165 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
CLDN20-201ENST00000367165 NPM3O75607 178 aaKnown RBP17.88■□□□□ 0.45
CLDN20-201ENST00000367165 CADPSQ9ULU8 1353 aa17.88■□□□□ 0.45
CLDN20-201ENST00000367165 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
CLDN20-201ENST00000367165 WIZO95785 1651 aa17.79■□□□□ 0.44
CLDN20-201ENST00000367165 WDR62O43379 1518 aa17.78■□□□□ 0.44
CLDN20-201ENST00000367165 KCNA4P22459 653 aa17.78■□□□□ 0.44
CLDN20-201ENST00000367165 CEP164Q9UPV0 1460 aa17.73■□□□□ 0.43
CLDN20-201ENST00000367165 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
CLDN20-201ENST00000367165 CFTRP13569 1480 aa17.65■□□□□ 0.42
CLDN20-201ENST00000367165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
CLDN20-201ENST00000367165 RSF1Q96T23 1441 aaPredicted RBP17.64■□□□□ 0.41
CLDN20-201ENST00000367165 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
CLDN20-201ENST00000367165 TRIM41Q8WV44 630 aa17.58■□□□□ 0.4
CLDN20-201ENST00000367165 URB2Q14146 1524 aaKnown RBP17.53■□□□□ 0.4
CLDN20-201ENST00000367165 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
CLDN20-201ENST00000367165 DSG3P32926 999 aa17.44■□□□□ 0.38
CLDN20-201ENST00000367165 PRDM2Q13029 1718 aa17.41■□□□□ 0.38
CLDN20-201ENST00000367165 CCDC88BA6NC98 1476 aa17.38■□□□□ 0.37
CLDN20-201ENST00000367165 IFT140Q96RY7 1462 aa17.37■□□□□ 0.37
CLDN20-201ENST00000367165 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
CLDN20-201ENST00000367165 ZNF608Q9ULD9 1512 aaPredicted RBP17.32■□□□□ 0.36
CLDN20-201ENST00000367165 ABCC8Q09428 1581 aa17.29■□□□□ 0.36
CLDN20-201ENST00000367165 DNMBPQ6XZF7 1577 aa17.26■□□□□ 0.35
CLDN20-201ENST00000367165 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
CLDN20-201ENST00000367165 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
CLDN20-201ENST00000367165 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
CLDN20-201ENST00000367165 EIF4G3O43432 1585 aaKnown RBP17.25■□□□□ 0.35
CLDN20-201ENST00000367165 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
CLDN20-201ENST00000367165 CAPN15O75808 1086 aa17.23■□□□□ 0.35
CLDN20-201ENST00000367165 ARHGEF11O15085 1522 aa17.21■□□□□ 0.35
CLDN20-201ENST00000367165 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
CLDN20-201ENST00000367165 TARBP1Q13395 1621 aaKnown RBP17.17■□□□□ 0.34
CLDN20-201ENST00000367165 AQRO60306 1485 aaKnown RBP eCLIP17.14■□□□□ 0.33
CLDN20-201ENST00000367165 POLA1P09884 1462 aaPredicted RBP17.14■□□□□ 0.33
CLDN20-201ENST00000367165 CHD1O14646 1710 aa17.09■□□□□ 0.33
CLDN20-201ENST00000367165 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
CLDN20-201ENST00000367165 SOGA1O94964 1423 aa17.04■□□□□ 0.32
CLDN20-201ENST00000367165 WDR97A6NE52 1622 aa17.04■□□□□ 0.32
CLDN20-201ENST00000367165 FBLN2P98095 1184 aa17.04■□□□□ 0.32
CLDN20-201ENST00000367165 CYB5RLQ6IPT4 315 aa17.04■□□□□ 0.32
CLDN20-201ENST00000367165 ARAP1Q96P48 1450 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms