RNA–Protein interactions for RNA: ENST00000554572.5

ESR2-208, Transcript of estrogen receptor 2, humanhuman

TSL 1 (best) BASIC

Gene ESR2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR2-208ENST00000554572 NISCHQ9Y2I1 1504 aa20.85■□□□□ 0.93
ESR2-208ENST00000554572 SHROOM4Q9ULL8 1493 aa18.91■□□□□ 0.62
ESR2-208ENST00000554572 SUPT5HO00267 1087 aaKnown RBP18.8■□□□□ 0.6
ESR2-208ENST00000554572 DCAF8L2P0C7V8 631 aa18.47■□□□□ 0.55
ESR2-208ENST00000554572 PCGF6Q9BYE7 350 aa18.14■□□□□ 0.49
ESR2-208ENST00000554572 HRCP23327 699 aa17.93■□□□□ 0.46
ESR2-208ENST00000554572 PPARGC1BQ86YN6 1023 aaKnown RBP17.92■□□□□ 0.46
ESR2-208ENST00000554572 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
ESR2-208ENST00000554572 EHMT2Q96KQ7 1210 aa17.74■□□□□ 0.43
ESR2-208ENST00000554572 LOC105371045A0A1W2PR82 267 aa17.73■□□□□ 0.43
ESR2-208ENST00000554572 CCDC180Q9P1Z9 1646 aa17.73■□□□□ 0.43
ESR2-208ENST00000554572 MYO15BQ96JP2 1530 aa17.69■□□□□ 0.42
ESR2-208ENST00000554572 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
ESR2-208ENST00000554572 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
ESR2-208ENST00000554572 TRIM26Q12899 539 aaPredicted RBP17.32■□□□□ 0.36
ESR2-208ENST00000554572 TRIM41Q8WV44 630 aa17.23■□□□□ 0.35
ESR2-208ENST00000554572 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
ESR2-208ENST00000554572 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
ESR2-208ENST00000554572 ZEB1P37275 1124 aaPredicted RBP17.02■□□□□ 0.32
ESR2-208ENST00000554572 CCER1Q8TC90 406 aaPredicted RBP16.94■□□□□ 0.3
ESR2-208ENST00000554572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.92■□□□□ 0.3
ESR2-208ENST00000554572 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
ESR2-208ENST00000554572 ABCC9O60706 1549 aa16.86■□□□□ 0.29
ESR2-208ENST00000554572 SCRIBQ14160 1630 aa16.78■□□□□ 0.28
ESR2-208ENST00000554572 PELP1Q8IZL8 1130 aaKnown RBP16.76■□□□□ 0.27
ESR2-208ENST00000554572 YTHDC1Q96MU7 727 aaKnown RBP16.71■□□□□ 0.27
ESR2-208ENST00000554572 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
ESR2-208ENST00000554572 NEUROD1Q13562 356 aa16.61■□□□□ 0.25
ESR2-208ENST00000554572 DIEXFQ68CQ4 756 aaKnown RBP16.61■□□□□ 0.25
ESR2-208ENST00000554572 CENPBP07199 599 aaPredicted RBP16.6■□□□□ 0.25
ESR2-208ENST00000554572 RANGAP1P46060 587 aaPredicted RBP16.6■□□□□ 0.25
ESR2-208ENST00000554572 GTF3C3Q9Y5Q9 886 aa16.6■□□□□ 0.25
ESR2-208ENST00000554572 UBTFP17480 764 aaKnown RBP16.56■□□□□ 0.24
ESR2-208ENST00000554572 ACIN1Q9UKV3 1341 aaKnown RBP16.55■□□□□ 0.24
ESR2-208ENST00000554572 RB1CC1Q8TDY2 1594 aa16.49■□□□□ 0.23
ESR2-208ENST00000554572 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
ESR2-208ENST00000554572 NACADO15069 1562 aa16.45■□□□□ 0.22
ESR2-208ENST00000554572 CECR2Q9BXF3 1484 aa16.42■□□□□ 0.22
ESR2-208ENST00000554572 APLP2Q06481 763 aa16.3■□□□□ 0.2
ESR2-208ENST00000554572 MROH2BQ7Z745 1585 aa16.29■□□□□ 0.2
ESR2-208ENST00000554572 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
ESR2-208ENST00000554572 WIZO95785 1651 aa16.22■□□□□ 0.19
ESR2-208ENST00000554572 UNC13AQ9UPW8 1703 aa16.2■□□□□ 0.18
ESR2-208ENST00000554572 MIER1Q8N108 512 aa16.18■□□□□ 0.18
ESR2-208ENST00000554572 CSRNP3Q8WYN3 585 aa16.16■□□□□ 0.18
ESR2-208ENST00000554572 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
ESR2-208ENST00000554572 CEP162Q5TB80 1403 aa16.12■□□□□ 0.17
ESR2-208ENST00000554572 ITGAEP38570 1179 aa16.1■□□□□ 0.17
ESR2-208ENST00000554572 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
ESR2-208ENST00000554572 SOGA1O94964 1423 aa16.08■□□□□ 0.17
ESR2-208ENST00000554572 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
ESR2-208ENST00000554572 BAZ1AQ9NRL2 1556 aaPredicted RBP15.97■□□□□ 0.15
ESR2-208ENST00000554572 BICRAQ9NZM4 1560 aa15.97■□□□□ 0.15
ESR2-208ENST00000554572 RUSC2Q8N2Y8 1516 aa15.95■□□□□ 0.14
ESR2-208ENST00000554572 MYT1Q01538 1121 aa15.95■□□□□ 0.14
ESR2-208ENST00000554572 SMARCA4P51532 1647 aa15.94■□□□□ 0.14
ESR2-208ENST00000554572 BCANQ96GW7 911 aa15.92■□□□□ 0.14
ESR2-208ENST00000554572 TNIKQ9UKE5 1360 aa15.91■□□□□ 0.14
ESR2-208ENST00000554572 ATP1B4Q9UN42 357 aaPredicted RBP15.87■□□□□ 0.13
ESR2-208ENST00000554572 CLIP1P30622 1438 aa15.83■□□□□ 0.12
ESR2-208ENST00000554572 EIF4G1Q04637 1599 aaKnown RBP15.82■□□□□ 0.12
ESR2-208ENST00000554572 TOP2AP11388 1531 aaKnown RBP15.81■□□□□ 0.12
ESR2-208ENST00000554572 GOLGA3Q08378 1498 aa15.8■□□□□ 0.12
ESR2-208ENST00000554572 WRNQ14191 1432 aaPredicted RBP eCLIP15.8■□□□□ 0.12
ESR2-208ENST00000554572 SMARCA2P51531 1590 aa15.79■□□□□ 0.12
ESR2-208ENST00000554572 SUPT16HQ9Y5B9 1047 aaKnown RBP15.7■□□□□ 0.1
ESR2-208ENST00000554572 HIRIP3Q9BW71 556 aaPredicted RBP15.7■□□□□ 0.1
ESR2-208ENST00000554572 EEA1Q15075 1411 aa15.69■□□□□ 0.1
ESR2-208ENST00000554572 KANK4Q5T7N3 995 aaPredicted RBP15.66■□□□□ 0.1
ESR2-208ENST00000554572 KCNH8Q96L42 1107 aa15.66■□□□□ 0.1
ESR2-208ENST00000554572 FAM50AQ14320 339 aaKnown RBP15.65■□□□□ 0.1
ESR2-208ENST00000554572 DDX10Q13206 875 aaKnown RBP15.64■□□□□ 0.09
ESR2-208ENST00000554572 CEP164Q9UPV0 1460 aa15.63■□□□□ 0.09
ESR2-208ENST00000554572 NEFLP07196 543 aa15.63■□□□□ 0.09
ESR2-208ENST00000554572 FKBP8Q14318 412 aa15.62■□□□□ 0.09
ESR2-208ENST00000554572 VPS8Q8N3P4 1428 aa15.61■□□□□ 0.09
ESR2-208ENST00000554572 P3H3Q8IVL6 736 aa15.61■□□□□ 0.09
ESR2-208ENST00000554572 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
ESR2-208ENST00000554572 RAPGEF2Q9Y4G8 1499 aa15.59■□□□□ 0.09
ESR2-208ENST00000554572 TRIM52Q96A61 297 aa15.58■□□□□ 0.08
ESR2-208ENST00000554572 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
ESR2-208ENST00000554572 SIN3AQ96ST3 1273 aa15.52■□□□□ 0.08
ESR2-208ENST00000554572 DHX57Q6P158 1386 aaKnown RBP15.52■□□□□ 0.08
ESR2-208ENST00000554572 TSHZ2Q9NRE2 1034 aa15.52■□□□□ 0.07
ESR2-208ENST00000554572 BAZ1BQ9UIG0 1483 aaKnown RBP15.51■□□□□ 0.07
ESR2-208ENST00000554572 CNGB1Q14028 1251 aaPredicted RBP15.5■□□□□ 0.07
ESR2-208ENST00000554572 IRX6P78412 446 aaPredicted RBP15.45■□□□□ 0.06
ESR2-208ENST00000554572 SYNJ1O43426 1573 aa15.44■□□□□ 0.06
ESR2-208ENST00000554572 ERICH6Q7L0X2 663 aa15.42■□□□□ 0.06
ESR2-208ENST00000554572 ANP32CO43423 234 aa15.41■□□□□ 0.06
ESR2-208ENST00000554572 ANP32EQ9BTT0 268 aa15.41■□□□□ 0.06
ESR2-208ENST00000554572 CLSPNQ9HAW4 1339 aa15.4■□□□□ 0.06
ESR2-208ENST00000554572 KIF21BO75037 1637 aa15.38■□□□□ 0.05
ESR2-208ENST00000554572 CCNB3Q8WWL7 1395 aa15.38■□□□□ 0.05
ESR2-208ENST00000554572 RAB3GAP2Q9H2M9 1393 aa15.34■□□□□ 0.05
ESR2-208ENST00000554572 HNRNPUQ00839 825 aaKnown RBP eCLIP15.31■□□□□ 0.04
ESR2-208ENST00000554572 POLR3GLQ9BT43 218 aa15.29■□□□□ 0.04
ESR2-208ENST00000554572 NCAPD3P42695 1498 aa15.27■□□□□ 0.04
ESR2-208ENST00000554572 ARID3CA6NKF2 412 aa15.27■□□□□ 0.04
ESR2-208ENST00000554572 ARAP1Q96P48 1450 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms