Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 AC053503.5-201ENST00000601508 636 ntBASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA6Q9Y5G7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 AC073210.2-201ENST00000430369 194 ntBASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 AF201337.1-201ENST00000520239 748 ntBASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGA6Q9Y5G7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA6Q9Y5G7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA6Q9Y5G7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA6Q9Y5G7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA6Q9Y5G7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDHGA6Q9Y5G7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA6Q9Y5G7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 KRT18P6-201ENST00000555540 1265 ntBASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 TMEM191A-211ENST00000637163 1067 ntBASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 AC013268.1-206ENST00000638368 961 ntBASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 AC112229.1-201ENST00000639295 961 ntBASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 AC073130.3-201ENST00000624389 2278 ntBASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCDHGA6Q9Y5G7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 AL138781.1-201ENST00000566567 1274 ntBASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 AP006587.3-201ENST00000525742 1516 ntBASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGA6Q9Y5G7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 AC069152.1-201ENST00000438030 544 ntBASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGA6Q9Y5G7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms